| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3083 |
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| Symbol | thiM |
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| ID | 6971519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 2854840 |
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| End bp | 2855628 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643386915 |
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| Product | hydroxyethylthiazole kinase |
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| Protein accession | YP_002271383 |
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| Protein GI | 209395939 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2145] Hydroxyethylthiazole kinase, sugar kinase family |
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| TIGRFAM ID | [TIGR00694] hydroxyethylthiazole kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.150144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGTCG ACCTGCTGAG TTCCGCGCAA TCTGCGCACA CGTTACACCT TTTTCACCAA
CATTCCCCTC TTGTGCACTG CATGACCAAC GATGTGGTGC AAACCTTTAC TGCCAATACC
TTGCTGGCGC TCGGTGCATC GCCAGCGATG GTTATCGAAA CCGAAGAGGC CAGTCAGTTT
GCGGCTATCG CCAGTGCCTT GTTGATTAAC GTTGGCACAC TGACGCAGCC ACGCGCACAG
GCGATGCGTG CTGCCGTTGA GCAAGCAAAA AGCTCTCAAA CACCCTGGAC GCTTGATCCA
GTAGCGGTTG GTGCGCTCGA TTATCGCCGC CATTTTTGTC ATGAACTTTT ATCTTTTAAA
CCGGCAGCGA TACGTGGTAA TGCTTCGGAA ATCATGGCAT TAGCTGGCGT TGCTAATGGT
GGACGGGGAG TGGATACCAC TGACGCCGCA GTTAACGCGA TACCCGCTGC ACAAACACTG
GCACGGGAAA CTGGCGCAAT CGTCGTGGTC ACTGGCGAGG TGGATTATGT TACCGATGGC
CATCGCGCCG TTGGCATTCA CGGTGGCGAT CCGTTAATGA CCAAAGTGGT AGGAACTGGC
TGTGCATTAT CGGCGGTTGT CGCTGCCTGT TGTGCGTTAC CAGGCGATAT GCTGGAAAAT
GTCGCATCTG CCTGTCACTG GATGAAACAA GCCGGAGAAC GCGCAGTCGC CAGAAGCGAG
GGGCCAGGCA GTTTTGTTCC ACATTTCCTT GATGCGCTCT GGCAATTGAC GCAGGAGGTG
CAGGCATGA
|
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| Protein sequence | MQVDLLSSAQ SAHTLHLFHQ HSPLVHCMTN DVVQTFTANT LLALGASPAM VIETEEASQF
AAIASALLIN VGTLTQPRAQ AMRAAVEQAK SSQTPWTLDP VAVGALDYRR HFCHELLSFK
PAAIRGNASE IMALAGVANG GRGVDTTDAA VNAIPAAQTL ARETGAIVVV TGEVDYVTDG
HRAVGIHGGD PLMTKVVGTG CALSAVVAAC CALPGDMLEN VASACHWMKQ AGERAVARSE
GPGSFVPHFL DALWQLTQEV QA
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