Gene ECH74115_3081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3081 
Symbol 
ID6970500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2853160 
End bp2853978 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content48% 
IMG OID643386913 
Productglycosyl hydrolase family 25 
Protein accessionYP_002271381 
Protein GI209396750 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.150513 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTAA GAATTACCAG TCGAAAAAAA CTCACCGCTC TATTATGCGC TCTTGGGCTA 
ATTTCCATCG TTGCAATTTA TCCGCGTCAG ACGGTGAATT TTTTCTATTC GACAGCAGTT
CAGATTACAG ACTACATCCA CTTCTACGGT TATCGCCCGG TTAAATCTTT CGCTATTCAT
ATTCCTGCCA GTTACACCAT TCACGGAATA GATGTTTCGC GCTGGCAGGA GCGGATCGAC
TGGCAGCGGG TGGCAAAAAT GCGCGATAAC GGTATCCGCT TACAATTTGC CTTTATCAAG
GCGACGGAAG GCGAAAAGCT GGTGGACCCC TATTTTTCGC GTAACTGGCA ACTAAGCCGC
GAAAATGGCC TGCTGCGCGG GGCGTATCAT TATTTCTCCC CGTCGGTAGC AGCGCCTGTT
CAGGCGCGAT TATTTCTGCA AACGGTGGAT TTCTCACAAG GCGATTTCCC TGCCGTGCTG
GACGTAGAAG AACGGGGAAA ATTATCGGCA AAAGAATTAC GCAAGCGGGT AAGTCAGTGG
CTAAAAATGG TCGAAAAAAG TACGGGAAAA AAGCCGGTTA TTTACTCAGG AGCCGTTTTT
TATCACACCA ATCTGGCGGG CTATTTCAAT GAATATCCGT GGTGGGTGGC TCACTACTAT
CAACGTCGCC CGGACAATGA CGGCATGGCC TGGCGTTTCT GGCAGCATTC CGACCGTGGG
CAGGTAGATG GCATTAATGG TTCGGTGGAT TTTAATGTGT TTAATGGCAC AGAGGAGGAG
TTGCAGGCAT TCGTTGATGG GATTAAAGAA ACGCCTTAA
 
Protein sequence
MQLRITSRKK LTALLCALGL ISIVAIYPRQ TVNFFYSTAV QITDYIHFYG YRPVKSFAIH 
IPASYTIHGI DVSRWQERID WQRVAKMRDN GIRLQFAFIK ATEGEKLVDP YFSRNWQLSR
ENGLLRGAYH YFSPSVAAPV QARLFLQTVD FSQGDFPAVL DVEERGKLSA KELRKRVSQW
LKMVEKSTGK KPVIYSGAVF YHTNLAGYFN EYPWWVAHYY QRRPDNDGMA WRFWQHSDRG
QVDGINGSVD FNVFNGTEEE LQAFVDGIKE TP