Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3081 |
Symbol | |
ID | 6970500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 2853160 |
End bp | 2853978 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643386913 |
Product | glycosyl hydrolase family 25 |
Protein accession | YP_002271381 |
Protein GI | 209396750 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 0.150513 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCTAA GAATTACCAG TCGAAAAAAA CTCACCGCTC TATTATGCGC TCTTGGGCTA ATTTCCATCG TTGCAATTTA TCCGCGTCAG ACGGTGAATT TTTTCTATTC GACAGCAGTT CAGATTACAG ACTACATCCA CTTCTACGGT TATCGCCCGG TTAAATCTTT CGCTATTCAT ATTCCTGCCA GTTACACCAT TCACGGAATA GATGTTTCGC GCTGGCAGGA GCGGATCGAC TGGCAGCGGG TGGCAAAAAT GCGCGATAAC GGTATCCGCT TACAATTTGC CTTTATCAAG GCGACGGAAG GCGAAAAGCT GGTGGACCCC TATTTTTCGC GTAACTGGCA ACTAAGCCGC GAAAATGGCC TGCTGCGCGG GGCGTATCAT TATTTCTCCC CGTCGGTAGC AGCGCCTGTT CAGGCGCGAT TATTTCTGCA AACGGTGGAT TTCTCACAAG GCGATTTCCC TGCCGTGCTG GACGTAGAAG AACGGGGAAA ATTATCGGCA AAAGAATTAC GCAAGCGGGT AAGTCAGTGG CTAAAAATGG TCGAAAAAAG TACGGGAAAA AAGCCGGTTA TTTACTCAGG AGCCGTTTTT TATCACACCA ATCTGGCGGG CTATTTCAAT GAATATCCGT GGTGGGTGGC TCACTACTAT CAACGTCGCC CGGACAATGA CGGCATGGCC TGGCGTTTCT GGCAGCATTC CGACCGTGGG CAGGTAGATG GCATTAATGG TTCGGTGGAT TTTAATGTGT TTAATGGCAC AGAGGAGGAG TTGCAGGCAT TCGTTGATGG GATTAAAGAA ACGCCTTAA
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Protein sequence | MQLRITSRKK LTALLCALGL ISIVAIYPRQ TVNFFYSTAV QITDYIHFYG YRPVKSFAIH IPASYTIHGI DVSRWQERID WQRVAKMRDN GIRLQFAFIK ATEGEKLVDP YFSRNWQLSR ENGLLRGAYH YFSPSVAAPV QARLFLQTVD FSQGDFPAVL DVEERGKLSA KELRKRVSQW LKMVEKSTGK KPVIYSGAVF YHTNLAGYFN EYPWWVAHYY QRRPDNDGMA WRFWQHSDRG QVDGINGSVD FNVFNGTEEE LQAFVDGIKE TP
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