| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_3053 |
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| Symbol | |
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| ID | 6971517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 2828331 |
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| End bp | 2829365 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643386885 |
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| Product | phage portal protein, pbsx family |
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| Protein accession | YP_002271353 |
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| Protein GI | 209397035 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5518] Bacteriophage capsid portal protein |
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| TIGRFAM ID | [TIGR01540] phage portal protein, PBSX family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.355995 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.00000000672822 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAAGA AAAAAGGGAA AACACCGCAA CCTGCGGCAA AAAAAATGAC CGCCAGCGCC
CCGAAAATGG AGGCATTCAC CTTTGGTGAA CCGGTGCCGG TACTCGACCG CCGTGACATT
CTGGATTACG TCGAGTGCAT CAGTAACGGC AGATGGTATG AGCCACCGGT CAGCTTTACC
GGTCTGGCAA AAAGCCTGCG TGCTGCCGTA CATCACAGCT CACCGATTTA CGTCAAACGT
AATATTCTGG CTTCAACGTT TATTCCGCAC CCGTGGCTTT CCCAGCAGGA TTTCAGCCGC
TTTGTGCTGG ATTTTCTGGT GTTCGGTAAT GCGTTTCTGG AAAAGCGTTA CAGCACCACC
GGTAAGGTCA TCAGACTGGA AACCTCACCG GCAAAATATA CCCGCCGTGG CGTGGAGGAG
GATGTTTACT GGTGGGTGCC GTCCTTCAAC GAGCCGACAG CCTTCGCGCC CGGCTCCGTG
TTTCACCTGC TGGAGCCGGA TATTAATCAG GAGCTGTACG GCCTGCCGGA ATATCTCAGC
GCCCTTAATT CTGCCTGGCT GAATGAGTCG GCCACGCTGT TCCGCCGCAA GTATTACGAA
AACGGCGCTC ATGCCGGATA TATCATGTAC GTCACCGATG CCGTGCAGGA TCGCAACGAT
ATCGAAATGC TTCGCGAAAA CATGGTCAAG TCGAAAGGCC GCAACAACTT TAAAAATCTG
TTTCTCTATG CCCCGCAGGG GAAAGCCGAC GGCATTAAAA TTATCCCGCT CAGTGAAGTG
GCAACGAAGG ACGATTTTTT TAATATCAAA AAAGCCAGCG CCGCTGACCT GCTGGACGCG
CACCGCATCC CCTTTCAGTT GATGGGCGGC AAGCCGGAGA ACGTCGGGTC GCTGGGTGAT
ATTGAGAAAG TGGCAAAGGT CTTTGTCCGC AATGAGCTTA TCCCGCTACA GGACAGGATC
CGCGAGATAA ACGGCTGGCT CGGTCAGGAG GTCATCCGCT TTAAAAACTA CTCACTGGAC
ACTGACAACG GCTGA
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| Protein sequence | MSKKKGKTPQ PAAKKMTASA PKMEAFTFGE PVPVLDRRDI LDYVECISNG RWYEPPVSFT
GLAKSLRAAV HHSSPIYVKR NILASTFIPH PWLSQQDFSR FVLDFLVFGN AFLEKRYSTT
GKVIRLETSP AKYTRRGVEE DVYWWVPSFN EPTAFAPGSV FHLLEPDINQ ELYGLPEYLS
ALNSAWLNES ATLFRRKYYE NGAHAGYIMY VTDAVQDRND IEMLRENMVK SKGRNNFKNL
FLYAPQGKAD GIKIIPLSEV ATKDDFFNIK KASAADLLDA HRIPFQLMGG KPENVGSLGD
IEKVAKVFVR NELIPLQDRI REINGWLGQE VIRFKNYSLD TDNG
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