Gene ECH74115_3048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3048 
Symbol 
ID6970034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2823043 
End bp2823516 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content59% 
IMG OID643386880 
Productphage head completion protein GPL 
Protein accessionYP_002271348 
Protein GI209398475 
COG category 
COG ID 
TIGRFAM ID[TIGR00741] ribosomal subunit interface protein 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.0000100295 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGTCCGGTG AGGGTACGGT GGTCATCCCG CAACCGGCAG GCGACGAGCC GGTGATTAAA 
AACACGTTCT TTTTTCCCGA TATCGACCCG AAGCGCGTCC GGGAACGTAT GCGCCTTGAG
CAGACCGTCG CCCCCGCCCG TCTGCGTGAG GCCATCAAGT CAGGCATGGC GGAAACGAAT
GCGGAGCTGT ACGAGTACCG CGAACAGAAA ATTGCTGCCG GTTTTACGCG TCTGGCGGAC
GTCCCGGCGG ACGACATCGA CGGTGAAAGC ATCAAAGTTT TTTACTACGA GCGCGCCGTG
TGTGCGATGG CGACCGCATC GCTTTATGAG CGTTATCGCG GCGTGGATGC CAGTGCCAAG
GGCGACAAGA AGGCCGACAG CATTGACAGC ACCATTGATG AACTGTGGCG GGATATGCGC
TGGGCGGTGG CACGTATCCA GGACAAGCCG CGCTGCATCG TGAGTCAAAT CTGA
 
Protein sequence
MSGEGTVVIP QPAGDEPVIK NTFFFPDIDP KRVRERMRLE QTVAPARLRE AIKSGMAETN 
AELYEYREQK IAAGFTRLAD VPADDIDGES IKVFYYERAV CAMATASLYE RYRGVDASAK
GDKKADSIDS TIDELWRDMR WAVARIQDKP RCIVSQI