Gene ECH74115_3030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_3030 
Symbol 
ID6967305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2812984 
End bp2814174 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content56% 
IMG OID643386862 
Productphage tail sheath protein 
Protein accessionYP_002271330 
Protein GI209397008 
COG category[R] General function prediction only 
COG ID[COG3497] Phage tail sheath protein FI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.00296103 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGATT ATCATCACGG CGTGCAGGTG CTGGAGATTA ACGACGGCAC CCGCGTCATT 
TCCACCGTAT CCACCGCCAT TGTCGGCATG GTCTGCACGG CCAGCGATGC GGATGCGGAA
ACCTTCCCCC TCAATAAACC TGTGCTGATT ACCAATGTGC AGAGCGCAAT TGCAAAGGCC
GGTAAAAAAG GCACGCTGGC GGCATCGTTG CAGGCCATCG CTGACCAGTC AAAACCGGTT
ACCGTTGTCG TGCGTGTTGA AGACGGCACC GGCGACGACG AAGAAACGAA ACTCGCGCAG
ACCGTTTCCA ATATCATCGG CACCACTGAC GAAAACGGTC AGTATACCGG ACTGAAAGCC
CTGCTGGCGG CAGAGTCGGT AACCGGTGTT AAACCGCGTA TTCTCGGCGT GCCGGGACTG
GACACCAAAG AGGTGGCTGT TGCACTGGCA TCAGTCTGTC AGAAGCTGCG CGCTTTCGGG
TATATCAGCG CATGGGGCTG TAAAACCATT TCCGAGGTGA AAGCCTACCG CCAGAATTTC
AGCCAGCGTG AGCTGATGGT CATCTGGCCG GATTTCCTCG CATGGGATAC GGTCAGCAGC
ACCACCGCCA CCGCGTATGC CACCGCCCGT GCGCTGGGTC TGCGCGCTAA AATCGACCAG
GAGCAGGGCT GGCATAAAAC GCTGTCCAAC GTCGGGGTAA ACGGTGTTAA CGGCATCAGC
GCATCTGTAT TCTGGGATTT GCAGGAGTCC GGCACCGATG CTGACCTGCT TAACGAGTCA
GGCGTCACTA CGCTGATTCG CCGCGACGGT TTCCGCTTCT GGGGTAACCG TACCTGCTCT
GATGACCCGC TGTTCCTCTT TGAAAACTAC ACCCGCACCG CGCAGGTGCT GGCCGACACG
ATGGCTGAGG CGCACATGTG GGCGGTGGAC AAGCCCATCA CCGCAACGCT GATTCGCGAC
ATCGTTGACG GCATCAATGC CAAATTCCGT GAGCTGAAAA CAAACGGCTA TATCGTGGAT
GCGACCTGCT GGTTCAGCGA AGAATCCAGC GATGCGGAAA CCCTCAAGGC CGGAAAACTG
TATATCGACT ACGACTATAC ACCGGTACCT CCTCTTGAAA ACCTGACCCT GCGCCAGCGT
ATCACCGATA AATACCTGGC AAATCTGGTC ACCTCGGTTA ACAGCAATTA A
 
Protein sequence
MSDYHHGVQV LEINDGTRVI STVSTAIVGM VCTASDADAE TFPLNKPVLI TNVQSAIAKA 
GKKGTLAASL QAIADQSKPV TVVVRVEDGT GDDEETKLAQ TVSNIIGTTD ENGQYTGLKA
LLAAESVTGV KPRILGVPGL DTKEVAVALA SVCQKLRAFG YISAWGCKTI SEVKAYRQNF
SQRELMVIWP DFLAWDTVSS TTATAYATAR ALGLRAKIDQ EQGWHKTLSN VGVNGVNGIS
ASVFWDLQES GTDADLLNES GVTTLIRRDG FRFWGNRTCS DDPLFLFENY TRTAQVLADT
MAEAHMWAVD KPITATLIRD IVDGINAKFR ELKTNGYIVD ATCWFSEESS DAETLKAGKL
YIDYDYTPVP PLENLTLRQR ITDKYLANLV TSVNSN