Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_3014 |
Symbol | mdtA |
ID | 6972317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 2794284 |
End bp | 2795531 |
Gene Length | 1248 bp |
Protein Length | 415 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643386849 |
Product | multidrug efflux system subunit MdtA |
Protein accession | YP_002271317 |
Protein GI | 209400133 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.105913 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGCA GTTATAAATC CCGTTGGGTA ATCGTAATCG TGGTAGTTAT CGCCGCCATC GCCGCATTCT GGTTCTGGCA AGGCCGCAAT GACTCCCAGA GTGCAGCCCC AGGGGCGACG AAACAAGCGC AGCAATCGCC AGCGGGTGGT CGCCGTGGTA TGCGTTCCGG CCCATTAGCC CCGGTTCAGG CGGCGACCGC CGTAGAACAG GCAGTTCCGC GTTACCTCAC CGGGCTTGGC ACCATTACCG CTGCTAATAC TGTTACGGTG CGTAGCCGCG TGGACGGTCA ACTGATGGCG TTACATTTCC AGGAAGGCCA GCAGGTCAAA GCTGGCGATT TACTGGCAGA AATTGACCCC AGCCAGTTCA AAGTTGCATT AGCACAAGCC CAGGGCCAAC TGGCAAAAGA TAAAGCCACG CTTACCAACG CCCGCCGTGA TCTGGCGCGT TATCAGCAAC TGGCAAAAAC CAATCTCGTC TCCCGCCAGG AGCTGGATGC CCAACAGGCG CTGGTCAGTG AAACCGAAGG CACCATTAAG GCTGATGAAG CAAGCGTCGC CAGCGCGCAG CTGCAACTCG ACTGGAGCCG TATTACCGCA CCAGTCGATG GTCGCGTTGG TCTCAAGCAG GTTGATGTTG GTAACCAAAT CTCCAGTGGT GATACCACCG GGATCGTGGT GATCACCCAG ACGCATCCTA TCGATTTGCT CTTTACCCTG CCGGAAAGCG ATATCGCTAC CGTCGTGCAG GCGCAAAAAG CCGGAAAACC GCTGGTGGTA GAAGCCTGGG ATCGCACCAA CTCGAAGAAA TTAAGTGAAG GCACGCTGTT AAGTCTCGAT AACCAAATCG ATGCCACTAC CGGTACGATT AAAGTGAAAG CACGCTTTAA TAATCAGGAT GATGCGCTGT TTCCCAATCA GTTTGTTAAC GCGCGCATGT TAGTCGACAC CGAACAAAAC GCCGTAGTGA TCCCAACAGC CGCCCTGCAA ATGGGCAATG AAGGCCATTT TGTCTGGGTG CTGAATAGCG AAAACAAGGT CAGCAAACAT CTGGTGACGC CGGGCATTCA GGACAGTCAG AAAGTGGTGA TCCGCGCAGG TATTTCTGCG GGCGATCGCG TGGTGACAGA CGGCATTGAT CGCCTGACCG AAGGGGCGAA AGTGGAAGTG GTGGAAGCCC AGAGCGCCAC CACTCCGGAA GAGAAAGCCA CCAGCCGCGA ATACGCGAAA AAAGGAGCTC GCTCCTGA
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Protein sequence | MKGSYKSRWV IVIVVVIAAI AAFWFWQGRN DSQSAAPGAT KQAQQSPAGG RRGMRSGPLA PVQAATAVEQ AVPRYLTGLG TITAANTVTV RSRVDGQLMA LHFQEGQQVK AGDLLAEIDP SQFKVALAQA QGQLAKDKAT LTNARRDLAR YQQLAKTNLV SRQELDAQQA LVSETEGTIK ADEASVASAQ LQLDWSRITA PVDGRVGLKQ VDVGNQISSG DTTGIVVITQ THPIDLLFTL PESDIATVVQ AQKAGKPLVV EAWDRTNSKK LSEGTLLSLD NQIDATTGTI KVKARFNNQD DALFPNQFVN ARMLVDTEQN AVVIPTAALQ MGNEGHFVWV LNSENKVSKH LVTPGIQDSQ KVVIRAGISA GDRVVTDGID RLTEGAKVEV VEAQSATTPE EKATSREYAK KGARS
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