Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_2975 |
Symbol | galF |
ID | 6971770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 2752428 |
End bp | 2753321 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643386815 |
Product | UTP--glucose-1-phosphate uridylyltransferase subunit GalF |
Protein accession | YP_002271283 |
Protein GI | 209400008 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1210] UDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01099] UTP-glucose-1-phosphate uridylyltransferase [TIGR01105] UTP-glucose-1-phosphate uridylyltransferase, non-catalytic GalF subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00289257 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.0000000376119 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACGAATT TAAAAGCAGT TATACCGGTA GCAGGTCTTG GGATGCATAT GTTGCCTGCC ACTAAGGCGA TTCCCAAAGA GATGCTACCG ATCGTCGACA AGCCAATGAT TCAGTACATT GTTGACGAGA TTGTGGCTGC AGGGATCAAA GAAATCCTCC TGGTAACTCA CGCGTCCAAG AACGCAGTCG AAAACCACTT CGACACCTCT TATGAATTAG AATCTCTCCT TGAACAGCGC GTGAAGCGTC AACTACTGGC GGAAGTACAA TCTATCTGTC CGCCGGGCGT GACCATTATG AACGTGCGTC AGGGTGAACC TTTAGGTTTA GGCCACTCCA TTTTATGTGC GCGACCTGCC ATTGGTGACA ATCCATTTGT CGTGGTGCTG CCAGACGTTG TGATCGACGA CGCCAGCGCC GACCCGCTAC GCTACAACCT TGCTGCCATG ATTGCGCGCT TCAATGAAAC GGGACGCAGC CAGGTGCTGG CAAAACGTAT GCCGGGCGAC CTCTCTGAAT ACTCCGTCAT CCAGACCAAA GAACCGCTGG ATCGTGAAGG CAAAGTCAGC CGCATTGTTG AATTTATCGA AAAGCCGGAT CAGCCGCAGA CGCTGGACTC AGACATCATG GCCGTTGGTC GATATGTGCT TTCTGCCGAT ATTTGGCCGG AACTGGAACG TACTCAGCCT GGTGCATGGG GACGTATTCA GCTGACTGAT GCCATTGCTG AGCTGGCAAA AAAACAATCC GTTGATGCAA TGCTGATGAC TGGCGACAGT TACGACTGCG GTAAAAAAAT GGGCTATATG CAGGCGTTTG TGAAGTATGG ACTACGCAAC TTGAAAGAAG GGGCGAAGTT CCGCAAAGGT ATCGAGAAGC TGTTAAGCGA ATAA
|
Protein sequence | MTNLKAVIPV AGLGMHMLPA TKAIPKEMLP IVDKPMIQYI VDEIVAAGIK EILLVTHASK NAVENHFDTS YELESLLEQR VKRQLLAEVQ SICPPGVTIM NVRQGEPLGL GHSILCARPA IGDNPFVVVL PDVVIDDASA DPLRYNLAAM IARFNETGRS QVLAKRMPGD LSEYSVIQTK EPLDREGKVS RIVEFIEKPD QPQTLDSDIM AVGRYVLSAD IWPELERTQP GAWGRIQLTD AIAELAKKQS VDAMLMTGDS YDCGKKMGYM QAFVKYGLRN LKEGAKFRKG IEKLLSE
|
| |