Gene ECH74115_2972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2972 
Symbol 
ID6971856 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2749431 
End bp2750177 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content30% 
IMG OID643386812 
ProductWbdO 
Protein accessionYP_002271280 
Protein GI209397211 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.354784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.000000078637 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATAT CAGTTATAAC TGTGACTTAT AATAATGCTG AAGGGTTAGA AAAAACTTTA 
AGTAGTTTAT CAATTTTAAA AATAAAACCT TTTGAGATTA TTATAGTTGA TGGCGGCTCT
ACAGATGGAA CGAATCGTGT CATTAGTAGA TTTACTAGTA TGAATATTAC ACATGTTTAT
GAAAAAGATG AAGGGATATA TGATGCGATG AATAAGGGCC GAATGTTGGC CAAAGGCGAC
TTAATACATT ATTTAAACGC CGGCGATAGC GTAATTGGAG ATATATATAA AAATATCAAA
GAGCCATGTT TGATTAAAGT TGGCCTTTTC GAAAATGATA AACTTCTGGG ATTTTCTTCT
ATAACCCATT CAAATACAGG GTATTGTCAT CAAGGGGTGA TTTTCCCAAA GAATCATTCA
GAATATGATC TAAGGTATAA AATATGTGCT GATTATAAGC TTATTCAAGA GGTGTTTCCT
GAAGGGTTAA GATCTCTATC TTTGATTACT TCGGGTTATG TAAAATATGA TATGGGGGGA
GTATCTTCAA AAAAAAGAAT TTTAAGAGAT AAAGAGCTTG CCAAAATTAT GTTTGAAAAA
AATAAAAAAA ACCTTATTAA GTTTATTCCA ATTTCAATAA TCAAAATTTT ATTCCCTGAA
CGTTTAAGAA GAGTATTGCG GAAAATGCAA TATATTTGTC TAACTTTATT CTTCATGAAG
AATAGTTCAC CATATGATAA TGAATAA
 
Protein sequence
MKISVITVTY NNAEGLEKTL SSLSILKIKP FEIIIVDGGS TDGTNRVISR FTSMNITHVY 
EKDEGIYDAM NKGRMLAKGD LIHYLNAGDS VIGDIYKNIK EPCLIKVGLF ENDKLLGFSS
ITHSNTGYCH QGVIFPKNHS EYDLRYKICA DYKLIQEVFP EGLRSLSLIT SGYVKYDMGG
VSSKKRILRD KELAKIMFEK NKKNLIKFIP ISIIKILFPE RLRRVLRKMQ YICLTLFFMK
NSSPYDNE