Gene ECH74115_2876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2876 
Symbol 
ID6968208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2672503 
End bp2673240 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content58% 
IMG OID643386722 
Producttail assembly protein 
Protein accessionYP_002271193 
Protein GI209399152 
COG category[R] General function prediction only 
COG ID[COG1310] Predicted metal-dependent protease of the PAD1/JAB1 superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.00156382 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTCTATA GCAATATATT GGCGCACGCC CGGCGATGTG CGCCAGCGGA GTCGTGCGGC 
TTCGTGGTGA GAACGCCGGA GGGGGAGCGG TATATCCCTT GTGTGAATAT CTCTGCAGAG
CCGGAGGCGT ATTTTCGTAT TGCACCGGAA GACTGGCTGC GGGCAGAGAT GCAGGGGGAG
ATTGTGGCAC TGGTCCACAG TCATCCCGGT GGTCTGCCCT GGCTGAGCGA GGCCGACCGG
CGGCTGCAGA TAAAAAGTGC ACTGTCCTGG TGGCTGGTCT GCCGGGGGGA CATTCATAAA
TTCCGCTGTG TGCCACATCT GACAGGACGG CGCTTTGAGC ACGGGGTGAC GGACTGTTAC
ACGCTGTTCC GGGATGCATA CCATCTGGCG GGAATTGATA TGCCGGATTT TGAGCGTGAG
GATGACTGGT GGCGTAACGG TCAGAACCTT TACCTGGACA ATATGGCGGT CACCGGCTTT
TACCGGGTGC CCCTGTCCTC TGCACAGGCG GGCGATATCC TGCTGTGCTG CTTTGGCGCA
TCGGTGGCCA ATCATGCCGC CATATACTGC GGCAACGGTG AACTGCTTCA CCATCTGCCT
GAACAACTGA GTAAACGGGA GAGGTATTCC GAAAAATGGC AACGACGAAC GCATTCTGTC
TGGCGTCACC GCCACTGGCA CGCATCTGCC TTCACGGGGA TTTGCAACGA TTTGGCCGCC
GCCTCAGCCT GTATGTGA
 
Protein sequence
MLYSNILAHA RRCAPAESCG FVVRTPEGER YIPCVNISAE PEAYFRIAPE DWLRAEMQGE 
IVALVHSHPG GLPWLSEADR RLQIKSALSW WLVCRGDIHK FRCVPHLTGR RFEHGVTDCY
TLFRDAYHLA GIDMPDFERE DDWWRNGQNL YLDNMAVTGF YRVPLSSAQA GDILLCCFGA
SVANHAAIYC GNGELLHHLP EQLSKRERYS EKWQRRTHSV WRHRHWHASA FTGICNDLAA
ASACM