Gene ECH74115_2871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2871 
Symbol 
ID6968461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2666162 
End bp2667475 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content60% 
IMG OID643386717 
Producttail fiber protein 
Protein accessionYP_002271188 
Protein GI209396826 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3064] Membrane protein involved in colicin uptake 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.0235495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTAA AGATTTCAGG TGTACTGAAA GACGGCACAG GAAAACCGGT AGAGAACTGC 
ACCATTCAAC TGAAAGCCAG ACGGACCAGC AGCACGGTGG TGGTGAACAC GGTGGCCTCT
GAAAATCCGG ATGAAGCCGG TCGTTACAGC ATGGACGTTG AGTACGGTCA GTACAGCGTC
ATTCTGTTGG TGGAGGGCTT CCCGCCGTCA CATGCCGGGA CCATCACCGT GTATGAAGAT
TCTCAACCGG GGACGCTGAA TGATTTTCTC GGTGCCATGT CGGAGGATGA CGTCCGGCCG
GAGGCACTGC GTCGTTTTGA ACTGATGGTG GAAGAAGCGG CGCGTCACGC TGAGGAGGCG
AAGAAGAATG CCGGAGAGGC GGAGACGTCC GCGAGGAATG CCGGCATATC AGCCAGTCAG
GCAGAAGAGA GCGCGGCAAA TGCTGACACT TCAGCAGGGG ATGCATCGGA GTCAGCCCGG
CAGGCGGCAG AAAGTGCAGC CGCTGCAAAG CAGTCAGAGG AGGCGTCCTC GTCCTCGGCC
TCTGCGGCCG CTCAAAAAGC CAGTGAGTCA TTACAAAGTG CAACAGATGC TGAGTTGTCA
AAAAAGACGG CAGAAAGTGC AGCCGGTAAT GCAGCCAGGG ATGCAACGAC CGCAGCAGAA
AAAGCCCGGG AGTCAGCAGA AAGCGCACAG TCAGCGGAAC AAAGCAGGAT AGCGGCGGAA
GAAGCCGTAA ACCGAATCCC CACCGTGGTG GGGCCTCCCG GGCCAAAGGG GGAACCGGGG
CCCGCGGGTC CTCAGGGGCC GAAGGGAGAT AAAGGAGAGC GTGGAGACAC CGGCCCGGCA
GGGGCAACCG GCGAACGGGG ACCGGCAGGT GATGCTGGTC CGGCAGGCCC GCAGGGGCCG
AAAGGTGACA GGGGAGAGCG GGGAGAGACC GGTCTGACGG GAAATGCAGG TCCACAGGGT
CCAAAGGGAG ATACCGGTGC GGCAGGCCCG GCAGGCCCAC AGGGACCGAA AGGAGAAACA
GGTGCGGCTG GCCCGGTGGG GGCAACCGGA CCTCAGGGGC CGAAGGGCGA CCCGGGGGAG
ACGCAAATAC GGTTCCGTCT GGGGCCGGGA AACATTATTG AGACAAACAG CAATGGCTGG
TTCCCGGATA CAGATGGTGC GCTCATCACC GGACTGACCT TTCTTGACCC CAAAGATACC
ACACAGGTTC AGGGGCTGTT TCGGCATTTG CAGGTCAGGT TTGGTGACGG GCCGTGGCAG
GATGTTAAGG GGCTGAATGA AGTGGGCAGT GATACAGGCA GAACAGGAGA ATGA
 
Protein sequence
MAVKISGVLK DGTGKPVENC TIQLKARRTS STVVVNTVAS ENPDEAGRYS MDVEYGQYSV 
ILLVEGFPPS HAGTITVYED SQPGTLNDFL GAMSEDDVRP EALRRFELMV EEAARHAEEA
KKNAGEAETS ARNAGISASQ AEESAANADT SAGDASESAR QAAESAAAAK QSEEASSSSA
SAAAQKASES LQSATDAELS KKTAESAAGN AARDATTAAE KARESAESAQ SAEQSRIAAE
EAVNRIPTVV GPPGPKGEPG PAGPQGPKGD KGERGDTGPA GATGERGPAG DAGPAGPQGP
KGDRGERGET GLTGNAGPQG PKGDTGAAGP AGPQGPKGET GAAGPVGATG PQGPKGDPGE
TQIRFRLGPG NIIETNSNGW FPDTDGALIT GLTFLDPKDT TQVQGLFRHL QVRFGDGPWQ
DVKGLNEVGS DTGRTGE