Gene ECH74115_2808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2808 
Symbol 
ID6967688 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2611967 
End bp2613004 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content54% 
IMG OID643386659 
Producthypothetical protein 
Protein accessionYP_002271135 
Protein GI209397526 
COG category[R] General function prediction only 
COG ID[COG5529] Pyocin large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAATG CCTGGCTCAG ATTGTGGCAT GACATGCCAA ATGATCCCAA ATGGCGAACC 
ATTGCCAGGG TCTCAGGACA GCCAATCGCA ACAGTGATGG CGGTGTATAT CCACCTTCTG
GTGAGTGCGT CACGAAATGT CACGACATGT CACGGCGTGT CACTACGTGG TCACATTGAT
GTCACGACGG AAGATTTAGC AAGTGCGCTT GATGTGACGG AAGACGTGAT TGATTCAATT
TTGCATGCAA TGCAGGGGCG AGTTCTGGAT GGTGATCTTA TTTCCGGATG GGAAAAACGC
CAGGTGATGA AGGAGGATAA CGGTAATGTT TCGCAAACCG CAAAATCCCC GGCAGAGCGC
AAGAGAGCGC AGCGGGAGCG GGAAAGACTG CGGAAGCAGA ACACTGATTG TCACGATGAG
TCACGACGCG TCACGCATAT GTCACGACAA ATCACGACAG ATACAGATAC AGATAAAGAA
TTAAACCCCA CACATAACGC GCGCATGCGC GAGAGTGCTA CGACCGGTGA GTTGAATGAC
GCGTCGTTGC AGACAGCCGA ACCTGAATAC CTGGACGGCC TGAGCGAACC GATCGGGAAA
TTTCCGATGA CTGGAGTCTG GCAACCGTCG CCGGATTTTC GACAGCGGGC AGCAGTGTGG
GGTATGGCTC TGCCTGAGCC TGAGTTTACA CCTGCTGAGC TTGCCGCATT CCGGGATTAC
TGGATGGCGG AGGGGAAGGT TTTCACGCAG GTTCAGTGGG AGCAGAAATT TGCCCGTCAC
GTGCAGCACG TCAGGGCACA GGTAAAACCA GTCAGCAAGG GGGTAAGCCA TGCAGCACCA
GGTGGCACCG CATCACGGGC AGTTCAGGAA ATTCGGGCAG CACGTGAACA GTGGGAACGT
GAAAACGGAT TTATCAGCAA CGGAAACGGC CTGGAAGCTG TGGGAACTTA TGGGGGAGGT
GTATTCGAAC CGCTGGACCC AGAAGAACGG GGCTGCGCCG TCGAAGCTCT GGATTGCTCA
GATTGGCGCG ATGACTGA
 
Protein sequence
MANAWLRLWH DMPNDPKWRT IARVSGQPIA TVMAVYIHLL VSASRNVTTC HGVSLRGHID 
VTTEDLASAL DVTEDVIDSI LHAMQGRVLD GDLISGWEKR QVMKEDNGNV SQTAKSPAER
KRAQRERERL RKQNTDCHDE SRRVTHMSRQ ITTDTDTDKE LNPTHNARMR ESATTGELND
ASLQTAEPEY LDGLSEPIGK FPMTGVWQPS PDFRQRAAVW GMALPEPEFT PAELAAFRDY
WMAEGKVFTQ VQWEQKFARH VQHVRAQVKP VSKGVSHAAP GGTASRAVQE IRAAREQWER
ENGFISNGNG LEAVGTYGGG VFEPLDPEER GCAVEALDCS DWRDD