Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_2758 |
Symbol | |
ID | 6970895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 2578572 |
End bp | 2579891 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643386613 |
Product | tail fiber protein |
Protein accession | YP_002271092 |
Protein GI | 209400529 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3064] Membrane protein involved in colicin uptake |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.204827 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.264951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAATATGG CAGTAAAGAT TTCAGGTGTA CTGAAAGACG GCACAGGAAA ACCGGTAGAG AACTGCACCA TTCAACTGAA AGCCAGACGG ACCAGCAGCA CGGTGGTGGT GAACACGGTG GCCTCTGAAA ATCCGGATGA AGCCGGTCGT TACAGCATGG ACGTTGAGTA CGGTCAGTAC AGCGTCATTC TGTTGGTGGA GGGCTTCCCG CCGTCACATG CCGGGACCAT CACCGTGTAT GAAGATTCTC AACCGGGGAC GCTGAATGAT TTTCTCGGTG CCATGTCGGA GGATGACGTC CGGCCGGAGG CACTGCGTCG TTTTGAACTG ATGGTGGAAG AAGCGGCGCG TCACGCTGAG GAGGCGAAGA AGAATGCCGG AGAGGCGGAG ACATCAGCGA GGAATGCCGG CATATCATCC AGTAAGGCGG AAGCGAGCGC GGCAAATGCT GACACTTCAG CAGGGGATGC ATTGGAGTCA GCCCGGCAGG CGGCAGAAAG TGCAGCCGCT GCAAAGCAGT CAGAGGATGC GTCCTCGTCC TCGGCTTCTG CGGCCGCTCA AAAAGCCAGT GAGTCATCAC AAAGTGCAGC AGAAGCTGAA TTGTCAAGAA AGACGGCAGA AAGTGCAGCC GGTAATGCAG CCAGGGATGC AACGACCGCA ACAGAAAAAG CCCGGGAGTC AGCAGAAAGC GCACAGTCAG CGGAACAAAG CAGGATAGCG GCGGAAGAGG CCGTAAACCG AATCCCCACC GTGGTGGGAC CTCCCGGGCC AAAGGGGGAA CAGGGGCCCG CGGGTCCTCA GGGGCCGAAG GGTGATAAGG GAGAGCGCGG TGACACCGGC CCTGTCGGGG CAACCGGCGA ACGGGGACCG GCAGGTGATG CTGGTCCGGC AGGCCCGCAG GGGCCGAAAG GTGACAGGGG AGAGCGGGGA GAGACCGGTC TGACGGGAAA TGCAGGTCCA CAGGGTCCAA AGGGAGATAC CGGTGCGGCA GGCCCGGCAG GCCCACAGGG ACCGAAAGGA GAAACAGGTG CGGCTGGCCC GGTGGGGGCA ACCGGACCTC AGGGGCCGAA GGGCGACCCG GGGGAGACGC AAATACGGTT CCGTCTGGGG CCGGGAAACA TTATTGAGAC AAACAGCAAT GGCTGGTTCC CGGATACAGA TGGTGCGCTC ATCACCGGAC TGACCTTTCT TGCCCCCAAA GATACCACAC GGGTTCAGGG TTTTTTTCAG CATTTGCAGG TCAGGTTTGG TGACGGGCCG TGGCAGGATG TTAAGGGGCT GGATGAAGTG GGCAGTGATA CAGGCAGAAC AGGAGAATGA
|
Protein sequence | MNMAVKISGV LKDGTGKPVE NCTIQLKARR TSSTVVVNTV ASENPDEAGR YSMDVEYGQY SVILLVEGFP PSHAGTITVY EDSQPGTLND FLGAMSEDDV RPEALRRFEL MVEEAARHAE EAKKNAGEAE TSARNAGISS SKAEASAANA DTSAGDALES ARQAAESAAA AKQSEDASSS SASAAAQKAS ESSQSAAEAE LSRKTAESAA GNAARDATTA TEKARESAES AQSAEQSRIA AEEAVNRIPT VVGPPGPKGE QGPAGPQGPK GDKGERGDTG PVGATGERGP AGDAGPAGPQ GPKGDRGERG ETGLTGNAGP QGPKGDTGAA GPAGPQGPKG ETGAAGPVGA TGPQGPKGDP GETQIRFRLG PGNIIETNSN GWFPDTDGAL ITGLTFLAPK DTTRVQGFFQ HLQVRFGDGP WQDVKGLDEV GSDTGRTGE
|
| |