Gene ECH74115_2758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2758 
Symbol 
ID6970895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2578572 
End bp2579891 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content60% 
IMG OID643386613 
Producttail fiber protein 
Protein accessionYP_002271092 
Protein GI209400529 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3064] Membrane protein involved in colicin uptake 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.204827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.264951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATATGG CAGTAAAGAT TTCAGGTGTA CTGAAAGACG GCACAGGAAA ACCGGTAGAG 
AACTGCACCA TTCAACTGAA AGCCAGACGG ACCAGCAGCA CGGTGGTGGT GAACACGGTG
GCCTCTGAAA ATCCGGATGA AGCCGGTCGT TACAGCATGG ACGTTGAGTA CGGTCAGTAC
AGCGTCATTC TGTTGGTGGA GGGCTTCCCG CCGTCACATG CCGGGACCAT CACCGTGTAT
GAAGATTCTC AACCGGGGAC GCTGAATGAT TTTCTCGGTG CCATGTCGGA GGATGACGTC
CGGCCGGAGG CACTGCGTCG TTTTGAACTG ATGGTGGAAG AAGCGGCGCG TCACGCTGAG
GAGGCGAAGA AGAATGCCGG AGAGGCGGAG ACATCAGCGA GGAATGCCGG CATATCATCC
AGTAAGGCGG AAGCGAGCGC GGCAAATGCT GACACTTCAG CAGGGGATGC ATTGGAGTCA
GCCCGGCAGG CGGCAGAAAG TGCAGCCGCT GCAAAGCAGT CAGAGGATGC GTCCTCGTCC
TCGGCTTCTG CGGCCGCTCA AAAAGCCAGT GAGTCATCAC AAAGTGCAGC AGAAGCTGAA
TTGTCAAGAA AGACGGCAGA AAGTGCAGCC GGTAATGCAG CCAGGGATGC AACGACCGCA
ACAGAAAAAG CCCGGGAGTC AGCAGAAAGC GCACAGTCAG CGGAACAAAG CAGGATAGCG
GCGGAAGAGG CCGTAAACCG AATCCCCACC GTGGTGGGAC CTCCCGGGCC AAAGGGGGAA
CAGGGGCCCG CGGGTCCTCA GGGGCCGAAG GGTGATAAGG GAGAGCGCGG TGACACCGGC
CCTGTCGGGG CAACCGGCGA ACGGGGACCG GCAGGTGATG CTGGTCCGGC AGGCCCGCAG
GGGCCGAAAG GTGACAGGGG AGAGCGGGGA GAGACCGGTC TGACGGGAAA TGCAGGTCCA
CAGGGTCCAA AGGGAGATAC CGGTGCGGCA GGCCCGGCAG GCCCACAGGG ACCGAAAGGA
GAAACAGGTG CGGCTGGCCC GGTGGGGGCA ACCGGACCTC AGGGGCCGAA GGGCGACCCG
GGGGAGACGC AAATACGGTT CCGTCTGGGG CCGGGAAACA TTATTGAGAC AAACAGCAAT
GGCTGGTTCC CGGATACAGA TGGTGCGCTC ATCACCGGAC TGACCTTTCT TGCCCCCAAA
GATACCACAC GGGTTCAGGG TTTTTTTCAG CATTTGCAGG TCAGGTTTGG TGACGGGCCG
TGGCAGGATG TTAAGGGGCT GGATGAAGTG GGCAGTGATA CAGGCAGAAC AGGAGAATGA
 
Protein sequence
MNMAVKISGV LKDGTGKPVE NCTIQLKARR TSSTVVVNTV ASENPDEAGR YSMDVEYGQY 
SVILLVEGFP PSHAGTITVY EDSQPGTLND FLGAMSEDDV RPEALRRFEL MVEEAARHAE
EAKKNAGEAE TSARNAGISS SKAEASAANA DTSAGDALES ARQAAESAAA AKQSEDASSS
SASAAAQKAS ESSQSAAEAE LSRKTAESAA GNAARDATTA TEKARESAES AQSAEQSRIA
AEEAVNRIPT VVGPPGPKGE QGPAGPQGPK GDKGERGDTG PVGATGERGP AGDAGPAGPQ
GPKGDRGERG ETGLTGNAGP QGPKGDTGAA GPAGPQGPKG ETGAAGPVGA TGPQGPKGDP
GETQIRFRLG PGNIIETNSN GWFPDTDGAL ITGLTFLAPK DTTRVQGFFQ HLQVRFGDGP
WQDVKGLDEV GSDTGRTGE