| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2749 |
|---|
| Symbol | |
|---|
| ID | 6969932 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 2571106 |
|---|
| End bp | 2571519 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 643386604 |
|---|
| Product | transthyretin family protein |
|---|
| Protein accession | YP_002271083 |
|---|
| Protein GI | 209398126 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2351] Transthyretin-like protein |
|---|
| TIGRFAM ID | [TIGR02962] hydroxyisourate hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000377229 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 0.260044 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAGC GTTATTTAGT ACTCTCCGTA GTAACGGCTG CATTTTCATT ACCTTCTTTG
GTCTATGCTG CACAACAAAA CATTCTTAGC GTGCACATTT TGAACCAGCA AACAGGAAAA
CCCGCTGCCG ACGTGACAGT CACTCTTGAA AAGAAAGCGG ACAACGGCTG GTTACAACTT
AATACCGCCA AAACAGATAA GGATGGACGA ATTAAGGCAC TGTGGCCCGA GCAAACTGCA
ACTACGGGCG ATTACCGTGT CGTATTTAAA ACCGGGGACT ATTTCAAGAA ACAAAATCTT
GAAAGTTTCT TCCCTGAGAT CCCCGTTGAA TTTCATATTA ATAAAGTGAA CGAGCATTAT
CATGTGCCTT TATTACTTAG CCAATATGGG TATTCAACCT ATCGTGGCAG TTAA
|
|---|
| Protein sequence | MLKRYLVLSV VTAAFSLPSL VYAAQQNILS VHILNQQTGK PAADVTVTLE KKADNGWLQL
NTAKTDKDGR IKALWPEQTA TTGDYRVVFK TGDYFKKQNL ESFFPEIPVE FHINKVNEHY
HVPLLLSQYG YSTYRGS
|
|---|
| |