Gene ECH74115_2648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2648 
Symbol 
ID6966791 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2498400 
End bp2499065 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content53% 
IMG OID643386511 
Producthypothetical protein 
Protein accessionYP_002270993 
Protein GI209400994 
COG category[R] General function prediction only 
COG ID[COG3318] Predicted metal-binding protein related to the C-terminal domain of SecA 
TIGRFAM ID[TIGR02292] yecA family protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.265395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.000000180818 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAACGG GACCGTTAAA CGAAAGTGAG TTGGAATGGC TGGACGATAT TCTGACCAAA 
TACAACACTG ACCACGCCAT CCTTGATGTG GCGGAGCTGG ACGGTTTATT GACGGCGGTG
TTGAGTTCTC CGCAAGAGAT TGAACCGGCA CAGTGGCTGG TTGCCGTGTG GGGTGGGGCT
GACTATGTGC CGCGCTGGGC GTCAGAGAAA GAGATGACGC GCTTTATGAA CCTGGCTTTT
CAACATATGG CCGATACCGC AGAGCGTCTG AACGAATTCC CGGAGCAGTT TGAGCCGTTA
TTCGGCTTGC GAGAAGTTGA TGGCAGCGAG CTGACGATTG TTGAGGAGTG GTGCTTTGGC
TATATGCGGG GCGTGGCACT TTCTGACTGG TCAACATTGC CCGATTCGTT AAAACCAGCG
CTGGAGGCGA TAGCGCTGCA CGGTACTGAG GAAAACTTCG AGCGGGTAGA GAAGATGTCG
CCAGAAGCGT TTGAAGAGAG CGTAGATGCC ATTCGACTGG CGGCGCTTGA TCTACATGCG
TACTGGATGG CGCATCCGCA GGAAAAAGCT GTTCAGCAAC CGATCAAAGC AGAAGAGAAA
CCGGGGCGTA ACGATCCTTG CCCGTGCGGT AGTGGTAAAA AATTTAAGCA GTGCTGCCTG
CATTAA
 
Protein sequence
MKTGPLNESE LEWLDDILTK YNTDHAILDV AELDGLLTAV LSSPQEIEPA QWLVAVWGGA 
DYVPRWASEK EMTRFMNLAF QHMADTAERL NEFPEQFEPL FGLREVDGSE LTIVEEWCFG
YMRGVALSDW STLPDSLKPA LEAIALHGTE ENFERVEKMS PEAFEESVDA IRLAALDLHA
YWMAHPQEKA VQQPIKAEEK PGRNDPCPCG SGKKFKQCCL H