| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2647 |
|---|
| Symbol | tyrP |
|---|
| ID | 6970736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 2497127 |
|---|
| End bp | 2498338 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643386510 |
|---|
| Product | tyrosine-specific transport protein |
|---|
| Protein accession | YP_002270992 |
|---|
| Protein GI | 209395924 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0814] Amino acid permeases |
|---|
| TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.588852 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0000000318595 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAACA GAACCCTGGG AAGTGTTTTT ATCGTGGCGG GAACCACAAT TGGCGCAGGC
ATGCTGGCAA TGCCGCTGGC TGCGGCCGGT GTTGGTTTTA GCGTTACGTT AATCTTGTTG
ATTGGGCTTT GGGCGTTGAT GTGCTACACG GCGCTATTAC TGCTGGAGGT GTACCAGCAT
GTTCCGGCAG ATACCGGTCT GGGCACGCTG GCAAAACGCT ATCTGGGACG CTACGGTCAA
TGGCTGACGG GCTTCAGTAT GATGTTCTTA ATGTATGCTC TGACTGCGGC ATACATCAGC
GGTGCCGGTG AATTGTTGGC CTCCAGCATC AGCGACTGGA CAGGTATTTC AATGTCGGCA
ACCGCTGGCG TGTTGTTGTT CACTTTTGTT GCCGGTGGCG TGGTTTGTGT CGGGACATCG
CTGGTCGATT TATTTAACCG TTTTCTGTTC AGCGCCAAAA TTATTTTTCT GGTGGTGATG
CTGGTATTGC TGCTACCGCA TATTCACAAA GTGAATCTTT TAACCCTGCC GTTGCAACAG
GGGCTGGCAC TGTCTGCAAT CCCGGTGATT TTTACGTCGT TTGGTTTTCA CGGTAGCGTG
CCGAGTATTG TCAGCTATAT GGATGGCAAC ATTCGTAAGC TACGCTGGGT GTTTATAACC
GGTAGTGCGA TCCCCCTGGT GGCATATATT TTCTGGCAGG TGGCGACGCT TGGCAGCATT
GATTCAACAA CCTTTATGGG ATTGCTGGCT AATCATGCCG GATTAAACGG GCTGTTACAG
GCGTTACGCG AAATGGTGGC CTCTCCGCAT GTTGAGCTGG CAGTGCATTT ATTTGCTGAT
TTAGCCCTTG CCACGTCATT TCTCGGCGTT GCGTTAGGCT TATTTGATTA TCTGGCAGAT
TTGTTTCAGC GTTCAAATAC CGTTGGTGGA CGATTGCAAA CTGGAGCAAT TACCTTTCTG
CCACCGTTGG CGTTTGCACT GTTTTATCCA CGAGGATTTG TGATGGCGCT GGGTTACGCC
GGTGTGGCGC TGGCGGTACT GGCATTGATT ATCCCTTCGC TGTTGACCTG GCAAAGCAGA
AAGCACAATC CTCAAGCGGG TTACCGGGTC AAAGGTGGTC GTCCGGCGCT GGTGGTGGTG
TTTCTCTGTG GTATTGCTGT GATTGGCGTG CAATTTTTGA TTGCGGCAGG GTTGTTACCA
GAAGTGGGGT GA
|
|---|
| Protein sequence | MKNRTLGSVF IVAGTTIGAG MLAMPLAAAG VGFSVTLILL IGLWALMCYT ALLLLEVYQH
VPADTGLGTL AKRYLGRYGQ WLTGFSMMFL MYALTAAYIS GAGELLASSI SDWTGISMSA
TAGVLLFTFV AGGVVCVGTS LVDLFNRFLF SAKIIFLVVM LVLLLPHIHK VNLLTLPLQQ
GLALSAIPVI FTSFGFHGSV PSIVSYMDGN IRKLRWVFIT GSAIPLVAYI FWQVATLGSI
DSTTFMGLLA NHAGLNGLLQ ALREMVASPH VELAVHLFAD LALATSFLGV ALGLFDYLAD
LFQRSNTVGG RLQTGAITFL PPLAFALFYP RGFVMALGYA GVALAVLALI IPSLLTWQSR
KHNPQAGYRV KGGRPALVVV FLCGIAVIGV QFLIAAGLLP EVG
|
|---|
| |