| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2637 |
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| Symbol | araF |
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| ID | 6969060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 2492585 |
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| End bp | 2493574 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643386500 |
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| Product | L-arabinose ABC transporter, periplasmic L-arabinose-binding protein |
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| Protein accession | YP_002270982 |
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| Protein GI | 209399828 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000000000000871652 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACAAAT TTACTAAAGC CCTGGCAGCC ATTGGTCTGG CAGCCGTTAT GTCACAATCC
GCTATGGCGG AGAACCTGAA GCTCGGTTTC CTGGTGAAGC AACCGGAAGA GCCGTGGTTC
CAGACCGAAT GGAAGTTTGC CGATAAAGCC GGGAAGGATT TAGGGTTTGA GGTTATTAAG
ATTGCCGTGC CGGATGGCGA AAAAACATTG AACGCGATCG ATAGCCTGGC CGCCAGTGGC
GCAAAAGGTT TCGTTATTTG TACTCCGGAC CCGAAACTCG GCTCTGCCAT CGTGGCGAAA
GCGCGTGGCT ACGATATGAA AGTCATTGCC GTGGATGACC AGTTTGTTAA CGCCAAAGGT
AAGCCAATGG ATACCGTTCC TCTGGTGATG ATGGCGGCGA CCAAAATTGG CGAACGTCAG
GGCCAGGAAC TGTATAAAGA GATGCAGAAA CGTGGCTGGG ATGTCAAAGA AAGCGCGGTG
ATGGCGATTA CCTCCAACGA ACTGGATACG GCTCGTCGCC GTACTACGGG TTCTATGGAT
GCGCTGAAAG CTGCAGGATT CCCGGAAAAA CAAATTTATC AGGTACCTAC CAAATCTAAC
GACATCCCCG GGGCATTTGA CGCTGCCAAC TCAATGCTGG TTCAACATCC GGAAGTTAAA
CATTGGCTGA TCGTCGGTAT GAACGACAGC ACCGTGCTGG GCGGCGTACG CGCGACGGAA
GGTCAGGGCT TTAAAGCGGC CGATATCATC GGTATCGGTA TTAACGGTGT GGATGCGGTG
AGCGAACTGT CTAAGGCACA GGCAACCGGC TTCTACGGTT CCCTGTTGCC AAGCCCGGAC
GTACATGGTT ATAAGTCCAG CGAAATGCTT TACAACTGGG TAGCAAAAGG TGTTGAACCG
ACCAAATTCA CCGAAGTTAC CGACGTGGTG CTGATCACGC GTGACAACTT TAAAGAAGAA
CTGGAGAAAA AAGGTTTAGG CGGTAAGTAA
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| Protein sequence | MHKFTKALAA IGLAAVMSQS AMAENLKLGF LVKQPEEPWF QTEWKFADKA GKDLGFEVIK
IAVPDGEKTL NAIDSLAASG AKGFVICTPD PKLGSAIVAK ARGYDMKVIA VDDQFVNAKG
KPMDTVPLVM MAATKIGERQ GQELYKEMQK RGWDVKESAV MAITSNELDT ARRRTTGSMD
ALKAAGFPEK QIYQVPTKSN DIPGAFDAAN SMLVQHPEVK HWLIVGMNDS TVLGGVRATE
GQGFKAADII GIGINGVDAV SELSKAQATG FYGSLLPSPD VHGYKSSEML YNWVAKGVEP
TKFTEVTDVV LITRDNFKEE LEKKGLGGK
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