Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_2633 |
Symbol | otsA |
ID | 6971571 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 2487634 |
End bp | 2489058 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643386496 |
Product | trehalose-6-phosphate synthase |
Protein accession | YP_002270978 |
Protein GI | 209398057 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0380] Trehalose-6-phosphate synthase |
TIGRFAM ID | [TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0142463 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000000000000299712 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGTCGTT TAGTCGTAGT ATCTAACCGG ATTGCACCAC CAGATGAGCA CGCCGCCAGT GCCGGTGGCC TTGCCGTTGG CATACTGGGG GCACTGAAAG CCGCAGGCGG ACTGTGGTTT GGCTGGAGTG GTGAAACAGG GAATGAGGAT CAGCCGCTAA AAAAGGTGAA AAAGGGTAAC ATTACGTGGG CCTCTTTTAA CCTCAGCGAA CAGGACCTTG ACGAATACTA CAACCAATTC TCCAATGCCG TTCTCTGGCC TGCTTTTCAT TATCGCCTCG ATCTGGTGCA ATTTCAGCGT CCTGCCTGGG ACGGCTATCT ACGCGTAAAT GCGTTGCTGG CAGATAAATT ACTGCCGCTG TTGCAAGACG ATGACATTAT CTGGATCCAC GATTATCACC TGTTGCCATT TGCGCATGAA TTACGCAAAC GGGGAGTGAA TAATCGCATT GGTTTCTTTC TGCATATTCC TTTCCCGACA CCGGAAATCT TCAACGCGCT GCCGACATAT GACACCTTGC TTGAACAGCT TTGTGATTAT GATTTGCTGG GTTTCCAGAC AGAAAACGAT CGTCTGGCGT TCCTGGATTG CCTTTCTAAC CTGACCCGCG TCACGACACG TAGCGCAAAA AGCCATACAG CCTGGGGCAA AGCGTTTCGA ACAGAAGTTT ACCCGATTGG CATTGAGCCA AAAGAAATAG CCAAACAGGC TGCCGGGCCA CTGCCGCCAA AACTGGCGCA ACTTAAAGCG GAACTGAAAA ACGTACAAAA TATCTTTTCT GTCGAACGGC TGGATTATTC CAAAGGTTTG CCAGAGCGTT TTCTCGCCTA TGAAGCGTTG CTGGAAAAAT ATCCGCAGCA TCATGGTAAA ATTCGTTATA CCCAGATTGC ACCAACGTCG CGTGGTGATG TGCAAGCCTA TCAGGATATT CGTCATCAGC TCGAAAATGA AGCCGGACGA ATTAATGGTA AATACGGGCA ATTAGGCTGG ACGCCGCTTT ATTATTTGAA TCAGCATTTT GACCGTAAAT TACTGATGAA AATATTCCGC TACTCTGACG TGGGCTTAGT GACGCCACTG CGTGACGGGA TGAACCTGGT AGCAAAAGAG TATGTTGCCG CTCAGGACCC AGCCAACCCG GGCGTTCTTG TTCTTTCGCA ATTTGCGGGA GCGGCAAACG AGTTAACGTC GGCGTTAATT GTTAATCCCT ACGATCGTGA CGAAGTTGCA GCTGCGCTGG ATCGTGCATT GACTATGTCG CTGGCGGAAC GTATTTCCCG TCATGCAGAA ATGCTGGACG TTATCGTGAA AAACGATATT AACCACTGGC AGGAGTGCTT CATTAGCGAC CTAAAGCAGA TAGTTCCGCG AAGCGCGGAA AGCCAGCAGC GCGATAAAGT TGCTACCTTT CCTAAGCTTG TGTAG
|
Protein sequence | MSRLVVVSNR IAPPDEHAAS AGGLAVGILG ALKAAGGLWF GWSGETGNED QPLKKVKKGN ITWASFNLSE QDLDEYYNQF SNAVLWPAFH YRLDLVQFQR PAWDGYLRVN ALLADKLLPL LQDDDIIWIH DYHLLPFAHE LRKRGVNNRI GFFLHIPFPT PEIFNALPTY DTLLEQLCDY DLLGFQTEND RLAFLDCLSN LTRVTTRSAK SHTAWGKAFR TEVYPIGIEP KEIAKQAAGP LPPKLAQLKA ELKNVQNIFS VERLDYSKGL PERFLAYEAL LEKYPQHHGK IRYTQIAPTS RGDVQAYQDI RHQLENEAGR INGKYGQLGW TPLYYLNQHF DRKLLMKIFR YSDVGLVTPL RDGMNLVAKE YVAAQDPANP GVLVLSQFAG AANELTSALI VNPYDRDEVA AALDRALTMS LAERISRHAE MLDVIVKNDI NHWQECFISD LKQIVPRSAE SQQRDKVATF PKLV
|
| |