Gene ECH74115_2601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2601 
SymbolntpA 
ID6971540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2456404 
End bp2456913 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content52% 
IMG OID643386466 
ProductdATP pyrophosphohydrolase 
Protein accessionYP_002270948 
Protein GI209399929 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.110942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value0.760647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATAG ATAACTATGT GAATGGGATG AGCGAAGGCA GTCAACGAAG AGGCAGCGTG 
AAGGATAAAG TGTATAAGCG TCCCGTTTCG ATCTTAGTGG TCATCTACGC ACAAGATACG
AAACGGGTGC TGATGTTGCA GCGGCGTGAT GACCCCGATT TCTGGCAGTC GGTAACCGGC
AGCGTGGAAG AGGGTGAAAC CGCGCCGCAA GCTGCCATGC GCGAAGTAAA GGAAGAGGTC
ACCATTGATG TTGTCGCTGA ACAACTGACC TTAATTGACT GTCAGCGCAC GGTAGAGTTT
GAAATTTTTT CACATTTACG TCATCGCTAT GCGCCGGGCG TGACGCGTAA TACGGAATCA
TGGTTCTGTC TTGCGCTTCC GCATGAGCGG CAGATCGTTT TCACTGAACA TCTGGCTTAC
AAGTGGCTTG ATGCGCCTGC TGCGGCGGCG CTCACTAAGT CCTGGAGCAA CCGGCAGGCG
ATTGAACAGT TTGTAATTAA CGCTGCCTGA
 
Protein sequence
MSIDNYVNGM SEGSQRRGSV KDKVYKRPVS ILVVIYAQDT KRVLMLQRRD DPDFWQSVTG 
SVEEGETAPQ AAMREVKEEV TIDVVAEQLT LIDCQRTVEF EIFSHLRHRY APGVTRNTES
WFCLALPHER QIVFTEHLAY KWLDAPAAAA LTKSWSNRQA IEQFVINAA