Gene ECH74115_2548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2548 
SymbolmanZ 
ID6968838 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2412018 
End bp2412869 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content53% 
IMG OID643386416 
ProductPTS system mannose-specific transporter subunit IID 
Protein accessionYP_002270898 
Protein GI209395956 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3716] Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID 
TIGRFAM ID[TIGR00828] PTS system, mannose/fructose/sorbose family, IID component 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0049977 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGATA CAACTCAAAC TACCACCGAG AAAAAACTCA CTCAAAGTGA TATTCGTGGC 
GTCTTCCTGC GTTCTAACCT CTTCCAGGGT TCATGGAACT TCGAACGTAT GCAGGCACTG
GGTTTCTGCT TCTCTATGGT ACCGGCAATT CGTCGCCTCT ACCCTGAGAA CAACGAAGCT
CGTAAACAAG CTATTCGCCG TCACCTGGAG TTCTTTAACA CCCAGCCGTT CGTGGCTGCG
CCGATTCTCG GCGTAACCCT GGCGCTGGAA GAACAGCGTG CTAATGGCGC AGAGATCGAC
GACGGTGCTA TCAACGGTAT CAAAGTCGGT TTGATGGGGC CGCTGGCTGG TGTAGGCGAC
CCGATCTTCT GGGGAACCGT ACGTCCGGTA TTTGCAGCAC TGGGTGCCGG TATCGCGATG
AGCGGCAGCC TGTTAGGTCC GCTGCTGTTC TTCATCCTGT TTAACCTGGT GCGTCTGGCA
ACCCGTTACT ACGGCGTAGC GTATGGTTAC TCCAAAGGTA TCGATATCGT TAAAGATATG
GGTGGTGGCT TCCTGCAAAA ACTGACGGAA GGGGCGTCTA TCCTCGGCCT GTTTGTCATG
GGGGCATTGG TTAACAAGTG GACACATGTC AACATCCCGC TGGTTGTCTC TCGCATTACT
GACCAGACGG GCAAAGAACA CGTTACTACT GTCCAGACTA TTCTGGACCA GTTAATGCCA
GGCCTGGTAC CACTGCTGCT GACCTTTGCT TGTATGTGGC TACTGCGCAA AAAAGTTAAC
CCGCTGTGGA TCATCGTTGG CTTCTTCGTC ATCGGTATCG CTGGTTACGC TTGCGGCCTG
CTGGGACTGT AA
 
Protein sequence
MVDTTQTTTE KKLTQSDIRG VFLRSNLFQG SWNFERMQAL GFCFSMVPAI RRLYPENNEA 
RKQAIRRHLE FFNTQPFVAA PILGVTLALE EQRANGAEID DGAINGIKVG LMGPLAGVGD
PIFWGTVRPV FAALGAGIAM SGSLLGPLLF FILFNLVRLA TRYYGVAYGY SKGIDIVKDM
GGGFLQKLTE GASILGLFVM GALVNKWTHV NIPLVVSRIT DQTGKEHVTT VQTILDQLMP
GLVPLLLTFA CMWLLRKKVN PLWIIVGFFV IGIAGYACGL LGL