Gene ECH74115_2542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2542 
Symbol 
ID6970768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2404293 
End bp2404871 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content54% 
IMG OID643386410 
Producthypothetical protein 
Protein accessionYP_002270892 
Protein GI209397357 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.148066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAATACC GTAGCCTGAC GCTTGATGAT TTTTTATCGC GCTTTCAACT TTTGCGCCCG 
CAAATTAACC GGGAAACCCT AAATCATCGT CAGGCTGCCG TGTTAATCCC CATCGTCCGT
CGACCGCAAC CGGGGTTGTT GCTGACTCAG CGTTCAATTC ATCTGCGTAA ACACGCTGGA
CAAGTGGCAT TCCCTGGAGG TGCAGTCGAT GACACGGACG CATCAGTTAT CGCCGCCGCG
CTGCGCGAAG CTGAAGAAGA GGTTGCTATA CCGCCTTCCG CCGTTGAAGT TATCGGCGTG
CTGCCGCCCG TCGATAGCGT AACTGGCTAC CAGGTAACCC CAGTGGTCGG CATTATCCCG
CCCGATCTGC CGTATCGCGC CAGTGAAGAT GAAGTTTCCG CTGTGTTTGA AATGCCGCTC
GCCCAGGCAT TACATCTGGG TCGTTATCAC CCTTTAGATA TCTACCGCCG CGGCGATTCA
CATCGGGTAT GGCTATCCTG GTACGAACAG TATTTTGTAT GGGGAATGAC CGCAGGCATA
ATTCGTGAGC TGGCGCTGCA AATTGGTGTG AAACCCTGA
 
Protein sequence
MEYRSLTLDD FLSRFQLLRP QINRETLNHR QAAVLIPIVR RPQPGLLLTQ RSIHLRKHAG 
QVAFPGGAVD DTDASVIAAA LREAEEEVAI PPSAVEVIGV LPPVDSVTGY QVTPVVGIIP
PDLPYRASED EVSAVFEMPL AQALHLGRYH PLDIYRRGDS HRVWLSWYEQ YFVWGMTAGI
IRELALQIGV KP