Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_2535 |
Symbol | |
ID | 6971732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 2399448 |
End bp | 2401358 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643386403 |
Product | hypothetical protein |
Protein accession | YP_002270885 |
Protein GI | 209396774 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.50615 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGACG ATTTTGCACC AGACGGTCAG CTGGCGAAAG CGATACCAGG CTTTAAGCCG CGAGAACCAC AGCGACAGAT GGCGGTAGCC GTCACCCAGG CGATAGAAAA AGGCCAGCCG CTGGTGGTGG AAGCAGGAAC CGGTACGGGC AAAACCTACG CTTACCTGGC CCCTGCGCTG CGGGCGAAAA AGAAAGTCAT TATCTCGACC GGCTCAAAAG CGTTGCAGGA TCAGCTCTAT AGCCGCGATT TGCCGACGGT CTCAAAGGCG TTGAAATACA CGGGCAACGT GGCGTTGCTG AAAGGGCGCT CAAACTACCT CTGCCTCGAA CGTCTCGAAC AGCAGGCGCT GGCGGGGGGC GATCTTCCGG TACAAATATT AAGCGATGTG ATCCTGCTGC GCTCCTGGTC TAATCAAACA GTCGATGGTG ATATCAGCAC CTGCGTCAGC GTGGCGGAAG ATTCGCAGGC GTGGCCGCTG GTCACCAGCA CCAACGACAA CTGTCTTGGC AGCGACTGCC CGATGTATAA AGATTGCTTT GTGGTCAAAG CACGTAAAAA AGCGATGGAC GCCGATGTGG TGGTGGTAAA CCATCATCTC TTTCTGGCGG ATATGGTGGT TAAAGAGAGT GGATTTGGCG AGTTGATCCC GGAAGCGGAC GTCATGATCT TCGACGAAGC CCACCAGCTA CCGGACATTG CCAGCCAGTA TTTTGGTCAG TCACTCTCCA GTCGACAACT GCTCGACCTG GCAAAAGACA TCACCATCGC CTACCGCACC GAATTAAAAG ACACCCAGCA GTTACAAAAG TGCGCTGATC GTCTTGCCCA GAGTGCGCAG GATTTTCGTC TGCAACTCGG TGAACCAGGT TATCGCGGTA ACCTGCGTGA GCTGTTAGCT AATCCGCAAA TTCAGCGGGC ATTTTTACTG CTCGATGACA CCCTGGAACT TTGTTATGAC GTGGCGAAAC TGTCACTGGG GCGTTCCGCC TTGCTGGATG CGGCATTTGA GCGCGCCACG TTGTATCGCA CACGGCTGAA GCGGCTAAAA GAGATCAATC AGCCGGGCTA CAGCTACTGG TACGAATGCA CTTCGCGCCA TTTTACTCTG GCTCTCACGC CGCTCAGCGT GGCGGATAAA TTCAAAGAGT TAATGGCGCA AAAGCCCGGT AGCTGGATCT TCACCTCAGC AACGCTGTCG GTAAACGACG ATCTGCATCA TTTCACCTCG CGGCTTGGGA TAGAACAGGC GGAGTCGTTG CTATTGCCAA GCCCGTTTGA TTACAGCCGC CAGGCGTTAC TCTGTGTGCC GCGCAACCTG CCGCAAACCA ATCAACCGGG TTCCGCGCGG CAACTGGCGG CTATGCTGCG CCCGATCATC GAAGCTAACA ACGGTCGCTG TTTTATGCTT TGTACCTCGC ACGCCATGAT GCGCGATCTG GCCGAGCAGT TCCGCGCTAC CATGACGCTT CCCGTATTAT TGCAGGGGGA AACCAGCAAA GGGCAACTGT TGCAGCAATT TGTCAGTGCC GGTAACGCGC TTCTTGTGGC AACCAGTAGT TTCTGGGAGG GGGTGGACGT GCGTGGCGAT ACATTGTCAT TGGTGATTAT CGACAAATTG CCGTTTACCT CGCCTGATGA TCCATTGTTA AAAGCGCGCA TGGAAGATTG CCGTTTGCGC GGTGGCGACC CGTTCGATGA AGTACAACTG CCGGATGCGG TGATTACTCT CAAGCAGGGA GTCGGGCGAC TGATTCGCGA CGCCGACGAT CGCGGGGTTT TGGTAATTTG TGACAATCGG CTGGTGATGC GTCCTTACGG CGCGACGTTT CTCGCCAGTC TGCCGCCCGC GCCACGCACC CGTGACATTG CCCGTGCGGT TCGTTTCCTT GCGATACCAT CCTCCAGGTA A
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Protein sequence | MTDDFAPDGQ LAKAIPGFKP REPQRQMAVA VTQAIEKGQP LVVEAGTGTG KTYAYLAPAL RAKKKVIIST GSKALQDQLY SRDLPTVSKA LKYTGNVALL KGRSNYLCLE RLEQQALAGG DLPVQILSDV ILLRSWSNQT VDGDISTCVS VAEDSQAWPL VTSTNDNCLG SDCPMYKDCF VVKARKKAMD ADVVVVNHHL FLADMVVKES GFGELIPEAD VMIFDEAHQL PDIASQYFGQ SLSSRQLLDL AKDITIAYRT ELKDTQQLQK CADRLAQSAQ DFRLQLGEPG YRGNLRELLA NPQIQRAFLL LDDTLELCYD VAKLSLGRSA LLDAAFERAT LYRTRLKRLK EINQPGYSYW YECTSRHFTL ALTPLSVADK FKELMAQKPG SWIFTSATLS VNDDLHHFTS RLGIEQAESL LLPSPFDYSR QALLCVPRNL PQTNQPGSAR QLAAMLRPII EANNGRCFML CTSHAMMRDL AEQFRATMTL PVLLQGETSK GQLLQQFVSA GNALLVATSS FWEGVDVRGD TLSLVIIDKL PFTSPDDPLL KARMEDCRLR GGDPFDEVQL PDAVITLKQG VGRLIRDADD RGVLVICDNR LVMRPYGATF LASLPPAPRT RDIARAVRFL AIPSSR
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