| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2530 |
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| Symbol | rnd |
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| ID | 6969465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 2394987 |
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| End bp | 2396114 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643386399 |
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| Product | ribonuclease D |
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| Protein accession | YP_002270881 |
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| Protein GI | 209396542 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0349] Ribonuclease D |
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| TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00950185 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATTACC AAATGATTAC CACGGACGAT GCGCTGGCTT CTTTGTGTGA AGCCGTCCGT
GCCTTTCCGG CGATAGCCCT GGATACTGAA TTTGTTCGTA CGCGCACTTA TTACCCGCAG
CTGGGGTTGA TTCAACTTTT CGATGGCGAG CATCTGGCGC TAATTGATCC TCTCGGGATC
ACCGACTGGT CACCGCTGAA AGCGATCCTG CGCGATCCGT CCATCACAAA ATTTCTCCAT
GCAGGCAGTG AAGATCTGGA AGTGTTCCTC AATGTCTTTG GCGAATTACC ACAACCCCTG
ATTGACACGC AAATCCTTGC TGCCTTCTGC GGACGCCCGA TGTCATGGGG TTTCGCTTCC
ATGGTGGAAG AGTATTCCGG CGTTACGCTG GACAAGAGTG AATCGCGCAC CGACTGGCTG
GCCAGACCGC TGACCGAACG TCAGTGTGAA TATGCAGCGG CGGATGTCTG GTATCTGTTA
CCGATCACCG CCAAGCTTAT GGTAGAAACG GAGGCCTCCG GCTGGCTACC AGCGGCGCTG
GATGAATGTC GCCTGATGCA AATGCGTCGT CAGGAAGTCG TTGCGCCGGA AGATGCCTGG
CGTGATATCA CCAATGCCTG GCAATTACGC ACACGCCAAC TGGCCTGTCT GCAACTGTTA
GCCGACTGGC GACTGCGCAA GGCGCGAGAG CGCGATCTGG CGGTGAACTT TGTCGTGCGT
GAAGAGCATT TGTGGTCGGT AGCGCGTTAT ATGCCGGGAA GTTTAGGCGA ACTGGACAGC
CTGGGTTTAT CCGGTAGCGA AATCCGCTTT CACGGTAAAA CGCTGCTGGC GCTGGTGGAA
AAAGCGCAGA CATTGCCGGA AGAGGCCTTA CCGCAGCCGA TGCTTAACCT GATGGACATG
CCGGGTTATC GTAAAGCGTT TAAAGCGATT AAGTCGCTGA TTACTGACGT GAGCGAAACG
CACAAGATCA GCGCCGAATT GCTGGCATCG CGTCGGCAAA TCAACCAACT GCTGAACTGG
CACTGGAAAC TGAAACCGCA GAACAATTTG CCGGAGCTGA TTTCCGGCTG GCGTGGTGAG
CTGATGGCGG AAGCATTACA CAATTTATTG CAGGAATATC CGCAGTAA
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| Protein sequence | MNYQMITTDD ALASLCEAVR AFPAIALDTE FVRTRTYYPQ LGLIQLFDGE HLALIDPLGI
TDWSPLKAIL RDPSITKFLH AGSEDLEVFL NVFGELPQPL IDTQILAAFC GRPMSWGFAS
MVEEYSGVTL DKSESRTDWL ARPLTERQCE YAAADVWYLL PITAKLMVET EASGWLPAAL
DECRLMQMRR QEVVAPEDAW RDITNAWQLR TRQLACLQLL ADWRLRKARE RDLAVNFVVR
EEHLWSVARY MPGSLGELDS LGLSGSEIRF HGKTLLALVE KAQTLPEEAL PQPMLNLMDM
PGYRKAFKAI KSLITDVSET HKISAELLAS RRQINQLLNW HWKLKPQNNL PELISGWRGE
LMAEALHNLL QEYPQ
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