Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_2499 |
Symbol | ydjK |
ID | 6969219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 2366746 |
End bp | 2368125 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643386368 |
Product | major facilitator family transporter |
Protein accession | YP_002270850 |
Protein GI | 209397498 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.465931 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCAGA TAACAAAACC GCATTGTGGT GCACGGCTGG ATCGCTTACC GGATTGCCGC TGGCATTCAT CAATGTTTGC CATCGTCGCG TTTGGCTTGC TTGTCTGCTG GAGTAATGCC GTTGGTGGCT TGATCCTCGC GCAGCTGAAA GCGTTGGGCT GGACAGATAA TTCCACCACA GCCACATTCT CAGCAATCAC GACCGCCGGA ATGTTTCTCG GTGCGCTGGT GGGCGGCATC ATTGGCGACA AAACCGGTCG CAGAAATGCG TTCATCCTCT ATGAGGCCAT TCATATTGCC TCGATGGTTG TCGGTGCTTT CTCACCGAAT ATGGATTTCC TTATTGCCTG CCGTTTTGTG ATGGGAGTTG GGCTGGGAGC TTTACTGGTT ACGCTGTTTG CTGGTTTCAC CGAATATATG CCCGGTAGAA ATCGTGGAAC GTGGTCAAGT CGGGTTTCCT TTATTGGCAA CTGGTCATAT CCGCTCTGTT CATTGATAGC GATGGGACTC ACGCCGCTGA TTAGTGCAGA GTGGAACTGG CGGGTACAAC TGCTTATCCC TGCAATATTG TCGCTTATCG CTACGGCGCT GGCCTGGCGC TACTTTCCTG AATCCCCGCG CTGGCTGGAA TCGCGCGGAC GGTATCAGGA AGCCGAGAAA GTCATGCGGA GTATAGAAGA AGGCGTCATA CGCCATACAG GTAAACCTTT GCCGCCCGTG GTTATTGCTG ATGACGGTAA AGCACCACAA GCGGTGCCAT ATTCAGCCTT ACTGACAGGA GTATTACTGA AACGCGTGAT ATTAGGCTCT TGTGTGCTGA TTGCCATGAA CGTTGTGCAG TACACACTAA TTAACTGGTT GCCAACGATA TTCATGACCC AGGGGATTAA TTTAAAAGAC TCGATTGTTT TAAATACCAT GAGTATGTTT GGCACGCCAT TTGGCATTTT TATTGCCATG CTGGTGATGG ATAAAATTCC GCGTAAAACA ATGGGTGTGG GGCTATTAAT CCTGATTGCG GTGCTCGGAT ATATCTATTC ACTGCAAACC AGCATGTTGC TCATAACGTT GATTGGTTTC TTCCTGATTA CTTTCGTCTA TATGTACGTT TGCTATGCCT CGGCAGTGTA TGTCCCTGAG ATCTGGCCGA CAGAGGCCAA ACTCCGTGGC TCCGGTCTGG CGAATGCGGT AGGGCGAATC AGTGGTATTG CCGCACCTTA TGCCGTTGCA GTGCTGCTCA GTAGTTATGG CGTTACGGGA GTCTTTATTC TTCTGGGGGC GGTTTCAATT ATTGTCGCAA TTGCTATCGC CACCATTGGA ATCGAAACCA AAGGTGTCTC CGTTGAAAGT TTAAGTATTG ATGCAGTAGC CAATAAATAA
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Protein sequence | MDQITKPHCG ARLDRLPDCR WHSSMFAIVA FGLLVCWSNA VGGLILAQLK ALGWTDNSTT ATFSAITTAG MFLGALVGGI IGDKTGRRNA FILYEAIHIA SMVVGAFSPN MDFLIACRFV MGVGLGALLV TLFAGFTEYM PGRNRGTWSS RVSFIGNWSY PLCSLIAMGL TPLISAEWNW RVQLLIPAIL SLIATALAWR YFPESPRWLE SRGRYQEAEK VMRSIEEGVI RHTGKPLPPV VIADDGKAPQ AVPYSALLTG VLLKRVILGS CVLIAMNVVQ YTLINWLPTI FMTQGINLKD SIVLNTMSMF GTPFGIFIAM LVMDKIPRKT MGVGLLILIA VLGYIYSLQT SMLLITLIGF FLITFVYMYV CYASAVYVPE IWPTEAKLRG SGLANAVGRI SGIAAPYAVA VLLSSYGVTG VFILLGAVSI IVAIAIATIG IETKGVSVES LSIDAVANK
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