| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2466 |
|---|
| Symbol | astC |
|---|
| ID | 6969746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 2336568 |
|---|
| End bp | 2337788 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643386335 |
|---|
| Product | bifunctional succinylornithine transaminase/acetylornithine transaminase |
|---|
| Protein accession | YP_002270817 |
|---|
| Protein GI | 209400956 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
|---|
| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 0.841609 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCAGC CAATTACGCG TGAAAACTTT GATGAATGGA TGATACCTGT TTACGCTCCG
GCACCGTTTA TACCGGTACG TGGCGAAGGT TCGCGCTTGT GGGATCAGCA GGGGAAAGAG
TATATCGACT TCGCGGGTGG CATTGCGGTG AACGCGCTGG GCCATGCGCA TCCGGAACTG
CGTGAGGCGC TGAACGAACA GGCGAGTAAG TTCTGGCATA CCGGCAACGG TTACACCAAC
GAGTCGGTAC TGCGACTGGC GAAAAAATTG ATCGACGCCA CGTTTGCCGA TCGCGTTTTC
TTTTGTAACT CCGGTGCGGA AGCCAACGAA GCGGCGCTAA AACTGGCGCG TAAATTCGCT
CACGACCGCT ACGGCAGCCA TAAGAGCGGT ATCGTGGCGT TTAAAAATGC GTTTCATGGT
CGCACGCTGT TTACTGTTAG TGCGGGTGGG CAGCCAGCCT ATTCACAGGA TTTTGCGCCA
CTGCCACCAG ATATCCGTCA TGCTGCATAT AACGATATTA ACTCTGCCAG CGCGCTGATT
GACGACTCTA CCTGTGCGGT GATTGTCGAA CCCATCCAGG GTGAAGGCGG TGTGGTGCCA
GCCAGCAACG CATTTTTACA AGGTCTGCGT GAATTGTGTG ATCGCCACAA TGCGCTGTTG
ATTTTTGATG AAGTACAAAC CGGCGTCGGG CGTACCGGGG AACTGTATGC CTATATGCAC
TACGGCGTGA CGCCTGATCT GTTAACTACC GCCAAAGCTC TGGGCGGCGG TTTCCCGGTC
GGTGCGTTGT TAGCAACCGA AGAGTGCGCC AGCGTGATGA CCGTTGGCAC TCATGGCACC
ACCTATGGCG GCAATCCGCT GGCCTCGGCG GTGGCAGGCA AAGTGCTGGA GCTCATCAAT
ACGCCAGAGA TGCTTAACGG GGTTAAGCAA CGTCACGACT GGTTTGTTGA GCGTCTTAAT
ATTATTAATC ACCGCTATGG TTTGTTCAAT GAAGTTCGCG GCTTAGGTTT GCTGATTGGC
TGTGTACTGA ATGCCGATTA CGCCGGGCAA GCGAAACAGA TCTCTCAGGA AGCGGCGAAA
GCAGGCGTGA TGGTACTGAT TGCGGGTGGC AACGTGGTGC GTTTTGCGCC TGCGCTCAAT
GTCAGCGAAG AAGAGGTGAC GACCGGACTG GATCGCTTTG CAGTTGCTTG CGAACACTTT
GTTAGCCGAG GTTCATCATG A
|
|---|
| Protein sequence | MSQPITRENF DEWMIPVYAP APFIPVRGEG SRLWDQQGKE YIDFAGGIAV NALGHAHPEL
REALNEQASK FWHTGNGYTN ESVLRLAKKL IDATFADRVF FCNSGAEANE AALKLARKFA
HDRYGSHKSG IVAFKNAFHG RTLFTVSAGG QPAYSQDFAP LPPDIRHAAY NDINSASALI
DDSTCAVIVE PIQGEGGVVP ASNAFLQGLR ELCDRHNALL IFDEVQTGVG RTGELYAYMH
YGVTPDLLTT AKALGGGFPV GALLATEECA SVMTVGTHGT TYGGNPLASA VAGKVLELIN
TPEMLNGVKQ RHDWFVERLN IINHRYGLFN EVRGLGLLIG CVLNADYAGQ AKQISQEAAK
AGVMVLIAGG NVVRFAPALN VSEEEVTTGL DRFAVACEHF VSRGSS
|
|---|
| |