Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_2406 |
Symbol | ydiM |
ID | 6969218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 2277138 |
End bp | 2278292 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643386277 |
Product | major facilitator family transporter |
Protein accession | YP_002270759 |
Protein GI | 209400261 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 0.114813 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGTCA TTTTGATGAG CCTGAATATG GCCTCGCTGG AGACACTTTG GCAGTCTAAT GCCGCGGGTG TCTCGATAGT TATCTCATCG CTGGGCATTG GTCGATTAAG TGTCTTGCTT TTTGCAGGAT TATTATCCGA TCGCTTTGGT CGCCGCCCTT TTATCATGCT CGGGATGTGC TGCTATATGG CCTTCTTTTT TGGCATCCTG CAGACCAATA ACATCATTAT CGCTTATGTT TTTGGCTTTC TGGCGGGAAT GGCAAACAGT TTTCTCGATG CAGGCACTTA TCCCAGTTTG ATGGAAGCTT TTCCACGCTC ACCTGGGACA GCCAATATTT TAATTAAAGC ATTTGTTTCC AGCGGACAAT TTTTATTACC GCTAATCATT AGCCTGTTAG TGTGGGCTGA ACTGTGGTTC GGTTGGTCCT TTATGATTGC TGCAGGCATT ATGTTTATTA ACGCTCTGTT TTTATACCGT TGTACGTTCC CACCCCATCC GGGTCGTCGC TTACCTGTCA TAAAGAAAAC CACCAGCTCT ACGGAACATC GCTGTTCAAT TATCGATTTA GCCAGTTATA CCTTATATGG CTATATCTCA ATGGCAACGT TTTATCTGGT TAGCCAGTGG CTGGCACAGT ACGGACAATT TGTTGCAGGC ATGTCATACA CTATGTCGAT CAAACTACTC AGTATCTACA CCGTGGGTTC GCTGCTTTGT GTATTTATTA CCGCTCCACT CATTCGTAAT ACCGTTCGCC CAACAACATT ACTGATGCTG TACACCTTTA TCTCATTTAT TGCTCTGTTT ACCGTCTGCC TGCATCCCAC ATTTTATGTG GTGATAATAT TTTCTTTTGT CATTGGTTTT ACTTCTGCTG GAGGTGTTGT GCAAATTGGC CTGACGTTAA TGGCTGAACG TTTCCCTTAC GCTAAAGGTA AAGCTACAGG GATCTATTAC AGTGCGGGCA GTATTGCGAC CTTTACTATT CCGTTGATTA CGGCTCATCT GTCCCAAAGA AGTATTGCCG ATATTATGTG GTTCGATACC GCCATCGCTG CCATCGGTTT TTTACTGGCA CTGTTTATCG GCTTACGCAG CCGCAAAAAA ACGCGGCATC ACTCGCTAAA GGAAAATGTC GCTCCGGGTG GGTAA
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Protein sequence | MGVILMSLNM ASLETLWQSN AAGVSIVISS LGIGRLSVLL FAGLLSDRFG RRPFIMLGMC CYMAFFFGIL QTNNIIIAYV FGFLAGMANS FLDAGTYPSL MEAFPRSPGT ANILIKAFVS SGQFLLPLII SLLVWAELWF GWSFMIAAGI MFINALFLYR CTFPPHPGRR LPVIKKTTSS TEHRCSIIDL ASYTLYGYIS MATFYLVSQW LAQYGQFVAG MSYTMSIKLL SIYTVGSLLC VFITAPLIRN TVRPTTLLML YTFISFIALF TVCLHPTFYV VIIFSFVIGF TSAGGVVQIG LTLMAERFPY AKGKATGIYY SAGSIATFTI PLITAHLSQR SIADIMWFDT AIAAIGFLLA LFIGLRSRKK TRHHSLKENV APGG
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