| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2344 |
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| Symbol | rnfE |
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| ID | 6972053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 2216850 |
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| End bp | 2217545 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643386218 |
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| Product | electron transport complex RsxE subunit |
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| Protein accession | YP_002270702 |
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| Protein GI | 209396599 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
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| TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00490465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCGAAA TTAAAGACGT TATTGTTCAG GGGTTGTGGA AAAACAACTC TGCGCTGGTC
CAGTTGCTCG GCCTTTGTCC TCTGTTGGCT GTCACGTCTA CTGCCACTAA CGCTCTGGGT
TTAGGACTTG CGACTACGCT GGTACTGACG CTGACCAACC TGACCATTTC GACGCTGCGT
CACTGGACGC CAGCCGAGAT CCGCATTCCC ATTTACGTGA TGATCATCGC CTCGGTGGTC
AGCGCTGTAC AGATGCTGAT CAACGCCTAC GCCTTTGGCC TGTATCAATC ATTAGGGATT
TTTATTCCGC TGATTGTCAC TAACTGTATC GTTGTGGGCC GCGCTGAAGC CTTCGCTGCC
AAAAAAGGTC CGGCGCTTTC GGCACTGGAC GGCTTTTCAA TTGGTATGGG CGCAACCTGC
GCCATGTTCG TGCTGGGTTC ACTACGCGAA ATTATCGGCA ATGGCACATT GTTTGACGGT
GCAGATGCGC TGTTAGGTAG CTGGGCAAAA GTATTACGCG TGGAGATTTT CCACACCGAC
TCCCCTTTCC TGCTGGCGAT GCTGCCACCA GGTGCATTTA TTGGCCTGGG ACTGATGCTG
GCAGGAAAAT ACCTGATTGA TGAAAGAATG AAAAAGCGCC GTACTGAAGC AGCTGCCGAA
CGTGCATTGC CAAACGGTGA AACAGGGAAT GTCTGA
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| Protein sequence | MSEIKDVIVQ GLWKNNSALV QLLGLCPLLA VTSTATNALG LGLATTLVLT LTNLTISTLR
HWTPAEIRIP IYVMIIASVV SAVQMLINAY AFGLYQSLGI FIPLIVTNCI VVGRAEAFAA
KKGPALSALD GFSIGMGATC AMFVLGSLRE IIGNGTLFDG ADALLGSWAK VLRVEIFHTD
SPFLLAMLPP GAFIGLGLML AGKYLIDERM KKRRTEAAAE RALPNGETGN V
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