Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_2327 |
Symbol | uidB |
ID | 6971317 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 2198804 |
End bp | 2200177 |
Gene Length | 1374 bp |
Protein Length | 457 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 643386203 |
Product | glucuronide transporter |
Protein accession | YP_002270687 |
Protein GI | 209396395 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAAC AACTCTCCTG GCGCACCATC GTCGGCTACA GCCTTGGTGA CATCGCCAAT AACTTCGCCT TCGCAATGGG GGCGCTCTTC CTGTTGAGTT ACTACACCGA CGTCGCTGGC GTCGGTGCCG CTGCGGCGGG CACCATGCTG TTACTGGTGC GGGTATTCGA TGCCTTCGCC GACGTCTTTG CCGGACGAGT GGTGGACAGT GTGAATACCC GCTGGGGAAA ATTCCGCCCG TTTTTACTCT TCGGTACTGC GCCGTTAATG ATCTTCAGCG TGCTGGTATT CTGGGTGCCG ACCGACTGGA GCCATGGTAG CAAAGTGGTG TATGCATATT TGACCTACAT GGGCCTCGGG CTTTGCTACA GCCTGGTGAA TATTCCTTAT GGTTCACTTG CTACCGCGAT GACCCAACAA CCACAATCCC GCGCCCGTCT GGGCGCGGCT CGTGGGATTG CCGCTTCATT GACCTTTGTC TGCCTGGCAT TTCTGATAGG GCCGAGCATT AAGAACTCCA GCCCGGAAGA GATGGTGTCG GTATACCATT TCTGGACGAT TGTGCTGGCG ATTGCCGGAA TGGTGCTTTA CTTCATCTGC TTCAAATCGA CGCGTGAGAA TGTGGTACGT ATCGTGGCGC AGCCGTCATT GAAGATCAGT CTGCAAACCC TGAAACGGAA TCGCCCGCTG TTTATGTTGT GCATCGGTGC GCTGTGTGTG CTGATTTCGA CCTTCGCGGT CAGCGCCTCG TCGTTGTTCT ACGTGCGCTA TGTGTTAAAT GATACCGGGC TGTTCACTGT GCTGGTACTG GTGCAAAACC TGGTTGGTAC TGTGGCATCG GCACCGTTGG TGCCGGGGAT GGTCGCGAGG ATCGGTAAAA AGAATACCTT CCTGATTGGC GCTTTGCTGG GAACCTGCGG TTATCTGCTG TTCTTCTGGG TTTCCGTCTG GTCGCTGCCG GTGGCGTTGG TTGCGTTAGC CATTGCCTCA ATTGGTCAGG GCGTTACCAT GACCGTGATG TGGGCGCTGG AAGCTGATAC CGTAGAATAC GGTGAATACC TGACCGGCGT GCGAATTGAA GGGCTCACCT ATTCACTATT CTCATTTACC CGTAAATGCG GTCAGGCAAT CGGTGGTTCA ATTCCTGCCT TTATTTTGGG ATTAAGCGGA TATATCGCCA ATCAGGTGCA AACGCCGGAA GTAATTATGG GCATCCGCAC ATCAATTGCC TTAGTACCTT GCGGATTTAT GCTACTGGCA TTCGTTATTA TCTGGTTTTA TCCGCTCACG GATAAAAAAT TCAAAGAAAT CGTGGTTGAA ATTGATAATC GTAAAAAAGT GCAGCAGCAA TTAATCAGCG ATATCACTAA TTAA
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Protein sequence | MNQQLSWRTI VGYSLGDIAN NFAFAMGALF LLSYYTDVAG VGAAAAGTML LLVRVFDAFA DVFAGRVVDS VNTRWGKFRP FLLFGTAPLM IFSVLVFWVP TDWSHGSKVV YAYLTYMGLG LCYSLVNIPY GSLATAMTQQ PQSRARLGAA RGIAASLTFV CLAFLIGPSI KNSSPEEMVS VYHFWTIVLA IAGMVLYFIC FKSTRENVVR IVAQPSLKIS LQTLKRNRPL FMLCIGALCV LISTFAVSAS SLFYVRYVLN DTGLFTVLVL VQNLVGTVAS APLVPGMVAR IGKKNTFLIG ALLGTCGYLL FFWVSVWSLP VALVALAIAS IGQGVTMTVM WALEADTVEY GEYLTGVRIE GLTYSLFSFT RKCGQAIGGS IPAFILGLSG YIANQVQTPE VIMGIRTSIA LVPCGFMLLA FVIIWFYPLT DKKFKEIVVE IDNRKKVQQQ LISDITN
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