| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2318 |
|---|
| Symbol | rstA |
|---|
| ID | 6970153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | + |
|---|
| Start bp | 2188255 |
|---|
| End bp | 2188974 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643386196 |
|---|
| Product | DNA-binding transcriptional regulator RstA |
|---|
| Protein accession | YP_002270680 |
|---|
| Protein GI | 209400881 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0386418 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACTA TCGTATTTGT GGAAGATGAT GCGGAAGTCG GTTCACTGAT TGCCGCGTAC
CTGGCAAAAC ATGATATACA GGTTACCGTA GAGCCGCGCG GCGACCAGGC CGAAGAAACC
ATTTTGCGAG AAAATCCGGA TTTGGTGTTA CTCGACATCA TGCTACCAGG CAAGGACGGC
ATGACCATTT GTCGTGATTT ACGCGCAAAG TGGTCCGGAC CGATTGTTCT TCTAACCTCT
CTCGATAGCG ATATGAACCA CATCCTGGCA CTGGAAATGG GTGCCTGCGA CTATATTCTC
AAAACGACGC CCCCTGCTGT TTTGTTAGCG CGTTTACGTT TGCATTTGCG TCAGAATGAG
CAAGCCACGC TGACCAAAGG TCTTCAGGAA ACGTCACTGA CTCCCTACAA AGCCCTGCAT
TTCGGCACGT TGACCATCGA TCCTATCAAC CGCGTAGTCA CCCTGGCTAA CACTGAAATC
TCGCTCTCGA CAGCTGATTT CGAATTATTG TGGGAATTAG CTACCCATGC CGGGCAAATC
ATGGACCGCG ATGCATTGCT GAAAAATTTA CGCGGCGTCA GTTATGACGG CCTGGATCGT
AGCGTGGACG TGGCTATTTC GCGGTTAAGA AAAAAACTGC TCGATAACGC CGCTGAACCT
TATCGCATTA AAACTGTGCG TAACAAAGGC TATCTTTTTG CGCCTCATGC ATGGGAATAA
|
|---|
| Protein sequence | MNTIVFVEDD AEVGSLIAAY LAKHDIQVTV EPRGDQAEET ILRENPDLVL LDIMLPGKDG
MTICRDLRAK WSGPIVLLTS LDSDMNHILA LEMGACDYIL KTTPPAVLLA RLRLHLRQNE
QATLTKGLQE TSLTPYKALH FGTLTIDPIN RVVTLANTEI SLSTADFELL WELATHAGQI
MDRDALLKNL RGVSYDGLDR SVDVAISRLR KKLLDNAAEP YRIKTVRNKG YLFAPHAWE
|
|---|
| |