| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2313 |
|---|
| Symbol | pntA |
|---|
| ID | 6967874 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 2182467 |
|---|
| End bp | 2184053 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643386191 |
|---|
| Product | NAD(P) transhydrogenase subunit alpha |
|---|
| Protein accession | YP_002270675 |
|---|
| Protein GI | 209397404 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
|---|
| TIGRFAM ID | [TIGR00561] NAD(P) transhydrogenase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.530452 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTCCTG ACACAGGCAA ACCATCATCA ATAAAACCGA TGGAAGGGAA TATCATGCGA
ATTGGCATAC CAAGAGAACG GTTAACCAAT GAACCCCGTG TTGCAGCAAC GCCAAAAACA
GTGGAACAGC TGCTGAAACT GGGGTTTACC GTCGCGGTAG AGAGCGGCGC GGGTCAACTG
GCAAGTTTTG ACGATAAAGC GTTTGTGCAA GCGGGCGCTG AAATTGTAGA AGGGAATAGC
GTCTGGCAGT CAGAGATCAT TCTGAAGGTC AATGCGCCGT TAGATGATGA AATTGCGTTA
CTGAATCCTG GGACAACGCT GGTGAGTTTT ATCTGGCCTG CGCAGAATCC GGAATTAATG
CAAAAACTTG CGGAACGTAA CGTGACCGTG ATGGCGATGG ACTCTGTGCC GCGTATCTCA
CGCGCACAAT CGCTGGACGC ACTAAGCTCG ATGGCGAATA TCGCCGGTTA TCGCGCCATT
GTTGAAGCGG CACATGAATT TGGGTGCTTC TTTACCGGGC AAATTACTGC GGCCGGGAAA
GTGCCACCGG CAAAAGTGAT GGTGATTGGT GCGGGTGTTG CAGGTCTGGC CGCCATTGGC
GCAGCAAACA GTCTCGGCGC GATTGTGCGT GCATTCGACA CCCGCCCGGA AGTGAAAGAA
CAAGTTCAAA GTATGGGCGC GGAATTCCTC GAGCTGGATT TTAAAGAGGA AGCGGGCAGC
GGCGATGGCT ATGCCAAAGT GATGTCGGAC GCGTTCATCA AAGCGGAAAT GGAACTCTTT
GCCGCCCAGG CAAAAGAGGT CGATATCATT GTCACCACCG CGCTTATTCC AGGCAAACCA
GCGCCGAAGC TAATTACCCG TGAAATGGTT GACTCCATGA AGGCGGGCAG TGTGATTGTC
GACCTGGCAG CCCAAAACGG CGGCAACTGT GAATACACCG TGCCGGGTGA AATCTTCACT
ACGGAAAATG GTGTCAAAGT GATTGGCTAT ACCGATCTTC CGGGCCGTCT GCCGACGCAA
TCCTCACAGC TTTACGGCAC TAACCTCGTT AATCTGCTGA AACTGTTGTG CAAAGAGAAA
AACGGTAACA TCACTGTTGA TTTTGATGAT GTGGTGATTC GCGGCGTGAC TGTGATCCGT
GCGGGCGAAA TTACCTGGCC GGCACCGCCG ATTCAGGTAT CAGCTCAGCC GCAGGTGGCA
CAAAAAGCGG CACCGGAAGT GAAAACTGAG GAAAAATGTG CCTGTTCACC GTGGCGTAAA
TACGCGTTGA TGGCGCTGGC AATCATCCTT TTCGGCTGGC TGGCAAGCGT TGCGCCGAAA
GAGTTTCTTG GGCACTTCAC CGTTTTCGCG CTGGCCTGCG TTGTCGGTTA TTACGTGGTG
TGGAACGTAT CGCACGCGCT GCATACACCG TTGATGTCGG TCACCAACGC GATTTCAGGG
ATTATTGTTG TCGGAGCACT GTTGCAGATT GGCCAGGGCG GCTGGGTTAG CTTCCTTAGT
TTTATCGCGG TGCTTATAGC CAGCATTAAT ATTTTCGGTG GCTTCACCGT GACTCAGCGC
ATGCTGAAAA TGTTCCGCAA AAATTAA
|
|---|
| Protein sequence | MAPDTGKPSS IKPMEGNIMR IGIPRERLTN EPRVAATPKT VEQLLKLGFT VAVESGAGQL
ASFDDKAFVQ AGAEIVEGNS VWQSEIILKV NAPLDDEIAL LNPGTTLVSF IWPAQNPELM
QKLAERNVTV MAMDSVPRIS RAQSLDALSS MANIAGYRAI VEAAHEFGCF FTGQITAAGK
VPPAKVMVIG AGVAGLAAIG AANSLGAIVR AFDTRPEVKE QVQSMGAEFL ELDFKEEAGS
GDGYAKVMSD AFIKAEMELF AAQAKEVDII VTTALIPGKP APKLITREMV DSMKAGSVIV
DLAAQNGGNC EYTVPGEIFT TENGVKVIGY TDLPGRLPTQ SSQLYGTNLV NLLKLLCKEK
NGNITVDFDD VVIRGVTVIR AGEITWPAPP IQVSAQPQVA QKAAPEVKTE EKCACSPWRK
YALMALAIIL FGWLASVAPK EFLGHFTVFA LACVVGYYVV WNVSHALHTP LMSVTNAISG
IIVVGALLQI GQGGWVSFLS FIAVLIASIN IFGGFTVTQR MLKMFRKN
|
|---|
| |