Gene ECH74115_2305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2305 
Symbol 
ID6968465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2174795 
End bp2175688 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content53% 
IMG OID643386183 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002270667 
Protein GI209400317 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.112257 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTG AACTTCGTCA TCTGCGTTAC TTTGTTGCTG TTGCGGAAGA GCTGCATTTC 
GGGCGCGCCG CTGCCCGCCT GAATATTTCG CAACCGCCGC TAAGTCAGCA GATTCAGGCG
CTGGAGCAAC AAATTGGTGC CCGACTGCTG GCACGAACCA ATCGCAGTGT ATTGCTGACG
GCAGCAGGAA AACAGTTTCT TGCAGATAGT CGGCAAATCC TGTCTATGGT GGATGACGCT
GCCGCTCGCG CTGAAAGACT GCATCAGGGT GAAGCGGGGG AGTTGCGCAT TGGTTTTACT
TCGTCGGCTC CTTTTATTCG GGCGGTGTCC GATACGTTAT CGCTGTTTCG CCGAGATTAT
CCCGATGTCC ATTTACAAAC CCGCGAAATG AACACTCGCG AGCAAATCGC TCCGCTCATT
GAAGGAACGC TGGATATGGG ATTGCTGCGT AACACAGCGT TACCGGAGAC GCTTGAACAC
GCAGTCATCG TCCATGAACC GCTTATGGCG ATGATCCCGC ACGATCATCC CCTGGCAAAT
AACCCGAATG TAACGCTGGC TGAACTGGCG AAAGAACCCT TTGTCTTTTT TGATCCGCAC
GTCGGGACAG GGCTGTATGA CGATATTCTC GGGCTGATGC GACGTTACCA TTTGACGCCC
GTCATCACTC AGGAGGTGGG CGAGGCAATG ACCATCATCG GTCTGGTTTC CGCCGGTCTG
GGTGTTTCAA TTTTGCCTGC GTCATTTAAA CGTGTTCAGC TCAACGAAAT GCGCTGGGTG
CCGATTGCTG AAGAGGATGC GGTTTCTGAA ATGTGGTTGG TCTGGCCGAA ACATCATGAA
CAAAGTCCAG CTGCGCGTAA CTTTCGTATT CATCTGCTGA ATGCTCTCAG GTGA
 
Protein sequence
MNIELRHLRY FVAVAEELHF GRAAARLNIS QPPLSQQIQA LEQQIGARLL ARTNRSVLLT 
AAGKQFLADS RQILSMVDDA AARAERLHQG EAGELRIGFT SSAPFIRAVS DTLSLFRRDY
PDVHLQTREM NTREQIAPLI EGTLDMGLLR NTALPETLEH AVIVHEPLMA MIPHDHPLAN
NPNVTLAELA KEPFVFFDPH VGTGLYDDIL GLMRRYHLTP VITQEVGEAM TIIGLVSAGL
GVSILPASFK RVQLNEMRWV PIAEEDAVSE MWLVWPKHHE QSPAARNFRI HLLNALR