| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2304 |
|---|
| Symbol | mic |
|---|
| ID | 6966550 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 2173440 |
|---|
| End bp | 2174660 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643386182 |
|---|
| Product | transcriptional regulator Mic |
|---|
| Protein accession | YP_002270666 |
|---|
| Protein GI | 209397493 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 0.0485397 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTTGCTG AAAACCAGCC TGGGCACATT GATCAAATAA AGCAGACCAA CGCGGGCGCG
GTTTATCGCC TGATTGATCA GCTTGGTCCA GTCTCGCGTA TCGATCTTTC CCGTCTGGCG
CAGCTGGCTC CTGCCAGTAT CACTAAAATT GTCCGTGAGA TGCTCGAAGC ACACCTGGTG
CAAGAGCTGG AAATCAAAGA AGCGGGGAAC CGTGGCCGTC CGGCGGTGGG GCTGGTGGTT
GAAACTGAAG CCTGGCACTA TCTTTCTCTG CGCATTAGTC GCGGGGAGAT TTTCCTTGCT
CTGCGCGATC TGAGCAGCAA ACTGGTGGTG GAAGAGTCGC AGGAACTGGC GTTAAAAGAT
GACTCGCCAT TGCTGGATCG TATCATTTCC CATATCGATC AGTTTTTTAT CCGCCACCAG
AAAAAACTTG AGCGTCTAAC TTCGATTGCC ATAACCCTGC CGGGAATTAT TGATACGGAA
AATGGCATTG TACATCGCAT GCCGTTCTAC GAGGATGTAA AAGAGATGCC GCTCGGCGAG
GCTCTGGAGC AGCATACCGG CGTTCCGGTT TATATTCAGC ATGATATCAG CGCATGGACG
ATGGCAGAGG CCTTGTTTGG TGCCTCACGC GGGGCGCGCG ATGTGATTCA GGTGGTTATC
GATCACAACG TGGGGGCGGG CGTCATTACC GATGGTCATC TGCTACACGC AGGCAGCAGT
AGCCTCGTGG AAATAGGTCA CACACAGGTA GACCCATATG GTAAACGCTG TTATTGCGGG
AACCACGGCT GCCTCGAAAC CATCGCCAGT GTGGACAGTA TTCTTGAGCT GGCACAGCTG
CGTCTCAATC AATCCATGAG CTCGATGTTA CATGGGCAAC CGTTAACCGT GGACTCATTG
TGTCAGGCGG CATTGCGCGG CGATCTGCTG GCAAAAGACA TCATTACCGG GGTGGGCGCG
CATGTAGGGC GCATTCTTGC CATCATGGTG AATTTATTTA ACCCACAAAA AATACTGATT
GGCTCACCGT TAAGTAAAGC GGCAGATATC CTCTTCCCGG TCATCTCAGA TAGCATCCGT
CAGCAGGCCC TTCCTGCGTA TAGTCAGCAC ATTAGCGTTG AGAGTACTCA GTTTTCTAAC
CAGGGCACGA TGGCAGGGGC TGCGCTGGTA AAAGACGCGA TGTATAACGG TTCTTTGTTG
ATTCGTCTGT TGCAGGGTTA A
|
|---|
| Protein sequence | MVAENQPGHI DQIKQTNAGA VYRLIDQLGP VSRIDLSRLA QLAPASITKI VREMLEAHLV
QELEIKEAGN RGRPAVGLVV ETEAWHYLSL RISRGEIFLA LRDLSSKLVV EESQELALKD
DSPLLDRIIS HIDQFFIRHQ KKLERLTSIA ITLPGIIDTE NGIVHRMPFY EDVKEMPLGE
ALEQHTGVPV YIQHDISAWT MAEALFGASR GARDVIQVVI DHNVGAGVIT DGHLLHAGSS
SLVEIGHTQV DPYGKRCYCG NHGCLETIAS VDSILELAQL RLNQSMSSML HGQPLTVDSL
CQAALRGDLL AKDIITGVGA HVGRILAIMV NLFNPQKILI GSPLSKAADI LFPVISDSIR
QQALPAYSQH ISVESTQFSN QGTMAGAALV KDAMYNGSLL IRLLQG
|
|---|
| |