Gene ECH74115_2299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2299 
SymboldmsC2 
ID6970973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2169706 
End bp2170560 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content53% 
IMG OID643386177 
Productanaerobic dimethyl sulfoxide reductase, C subunit 
Protein accessionYP_002270661 
Protein GI209400906 
COG category[R] General function prediction only 
COG ID[COG3302] DMSO reductase anchor subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.00149119 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGAAATG GATGGCATGA ATGGCCACTG GTTATCTTTA CCGTATTGGG TCAATGCGTA 
GTAGGCGCGC TGATTGTTAG CGGAATTGGC TGGTTCGCCG CCAAAACTGA CGCAGACCGT
CAGCACATTG TTCGTGGCAT GTTTTTCCTC TGGCTGTTGA TGGGCATCGG GTTTATTGCC
TCTGTCATGC ACCTGGGATC GCCACTGCGG GCGTTTAACT CGCTGAATCG AATCGGAGCT
TCTGGTCTGA GTAACGAGAT TGCTGCCGGT TCCATATTTT TTGCCGTTGG CGGACTATGG
TGGCTGGTGG CGGTCATCGG TAAAATGCCG CAAGCGTTGG GGAAACTCTG GTTACTTGTC
AGCATGGCGC TCGGCGTCAT TTTCGTCTGG ATGATGACCT GCGTGTATCA AATCGACACT
GTGCCAACCT GGCATAACGG TTACACTACG CTGGCTTTCT TCGTGACGGT ATTGTTGAGT
GGTCCAATAC TTGCTGCCGC AATTCTGCGG GCAGCCCGCG TTACATTTAA TACCACACCA
TTTGCCATCA TTAGCGTTCT GGCGCTGATC GCTTGCGCCG GGGTGATTGT GCTGCAAGGT
TTGTCTCTGT CGTCTATTCA CTCATCCGTG CAACAAGCCA GCGCACTGGT ACCAGATTAC
GCCTCCTTAC AGGTCTGGCG TGTGGTATTG TTATGCGCAG GTCTAGGATG CTGGCTTTGT
CCGCTCATAC GTCGCCGTGA ACCTCACGTT GCCGGACTTA TTCTGGGGTT AATCCTCATT
CTTGGCGGTG AGATGATCGG GCGTGTGCTC TTTTATGGCC TGCACATGAC GGTAGGAATG
GCTATTGCAG GTTAA
 
Protein sequence
MGNGWHEWPL VIFTVLGQCV VGALIVSGIG WFAAKTDADR QHIVRGMFFL WLLMGIGFIA 
SVMHLGSPLR AFNSLNRIGA SGLSNEIAAG SIFFAVGGLW WLVAVIGKMP QALGKLWLLV
SMALGVIFVW MMTCVYQIDT VPTWHNGYTT LAFFVTVLLS GPILAAAILR AARVTFNTTP
FAIISVLALI ACAGVIVLQG LSLSSIHSSV QQASALVPDY ASLQVWRVVL LCAGLGCWLC
PLIRRREPHV AGLILGLILI LGGEMIGRVL FYGLHMTVGM AIAG