| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2296 |
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| Symbol | ynfE |
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| ID | 6971676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 2164166 |
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| End bp | 2166592 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643386174 |
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| Product | anaerobic dimethyl sulfoxide reductase, A subunit YnfE |
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| Protein accession | YP_002270658 |
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| Protein GI | 209400979 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.000000246763 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCAAAA ATGAACGAAT GGTGGGCATC AGCCGCAGAA CACTCGTTAA ATCTACCGCG
ATAGGTTCTC TGGCGCTGGC TGCAGGCGGT TTTTCTTTGC CGTTCACCCT GCGCAGTGCA
GCGGCAGCAG TACAACAGGC CAGCGAACAA GTGGTCTGGG GTGCCTGTTC CGTCAACTGT
GGTAGCCGCT GTGCACTTCG TCTACATGTT AAAGATAATG AAGTGGCCTG GGTGGAAACT
GACAACACCG GCAGCGATGA GTATGGCAAC CATCAGGTAC GCGCCTGTTT GCGCGGTCGC
TCCATCCGCC GGCGTATTAA TCATCCCGAT CGCTTGAATT ACCCAATGAA ACGCGTGGGT
AAACGCGGTG AAGGCAAATT CGAACGGATT AGCTGGGATG AAGCCCTGGA TACTATCGCC
AGTAGCCTGA AGAAAACCGT CGAACAATAT GGCAATGAGG CTGTATATAT TCAGTACTCT
TCGGGGATCG TTGGCGGCAA TATAACCCGC TCTTCGCCAT CAGCCTCGGC GGTCAAACGC
CTGATGAACT GCTACGGCGG TTCACTCAAC CAGTATGGCT CCTACAGCAC TGCGCAAATT
TCCTGTGCCA TGCCCTACAC CTACGGCAGT AATGATGGCA ACAGCACCAC GGATATTGAA
AACAGCAAGC TGGTCGTGAT GTTTGGTAAC AACCCGGCAG AAACCCGCAT GAGCGGCGGT
GGCATCACTT ATCTTCTTGA AAAATCCCGC GAAAAATCGA ACGCAAAAAT GATTGTTATC
GATCCGCGAT ATACCGATAC GGCTGCTGGT CGTGAAGATG AATGGCTTCC TATTCGCCCG
GGCACCGATG CCGCGCTGGT TGCGGGTATT GCCTGGGTAT TGATTAACGA AAATCTCGTT
GATCAACCTT TTCTCGATAA ATACTGCGTC GGCTATGACG AAAAAACCTT ACCCGCAGAT
GCACCCAAAA ATGGTCACTA TAAAGCCTAT ATTCTTGGTG AAGGTGACGA TAAAACAGCG
AAAACGCCGC AGTGGGCTTC GCAAATTACC GGTATCCCGG TGGACCGTAT CATCAAACTG
GCGCGTGAAA TTGGCACAGC AAAACCCGCT TATATCTGCC AGGGCTGGGG GCCGCAACGC
CAGGCAAACG GCGAGCTGAC CGCACGCGCT ATTGCTATGT TGCCTATTCT GACGGGCAAT
GTCGGCATCA GCGGCGGAAA TAGTGGCGCG CGTGAATCGA CCTATACCAT TACCATAGAG
CGCCTGCCGG TGCTGGATAA TCCGGTCAAA ACGTCAATTT CCTGCTTCAG CTGGACAGAT
GCTATCGATC ATGGCCCACA AATGACGGCA ATCCGCGACG GTGTCCGGGG CAAAGATAAA
CTGGATGTGC CCATTAAGTT CATCTGGAAC TACGCGGGAA ATACCCTGGT TAATCAGCAT
TCTGACATCA ACAAAACGCA TGAAATTCTG CAGGACGAAT CGAAATGCGA AATGATTGTG
GTCATCGAAA ACTTTATGAC CTCATCGGCA AAATATGCCG ACATTCTGCT GCCAGACCTG
ATGACTGTTG AGCAGGAAGA TATTATTCCT AACGACTACG CCGGTAACAT GGGATATCTC
ATTTTCCTCC AGCCTGTCAC CAGCGAAAAA TTCGAACGCA AACCGATTTA CTGGATCCTG
AGTGAAGTCG CGAAACGTCT TGGACCTGAC GTCTATCAAA AGTTCACTGA AGGTCGCACG
CAGGAACAAT GGTTACAACA TCTGTACGCC AAAATGCTTG CCAAAGATCC GGCGTTACCG
TCTTACGACG AACTGAAAAA AATGGGTATC TATAAGCGTA AAGATCCCAA TGGTCATTTT
GTCGCCTACA AAGCATTTCG TGACGACCCC GAGGCAAATC CACTTAAAAC ACCTTCCGGT
AAGATTGAAA TTTATTCCAG CAAGCTGGCG GAAATTGCCC GTACCTGGGA ACTGGAAAAA
GATGAAGTGA TAAGCCCACT GCCAGTTTAT GCCTCAACCT TTGAAGGCTG GGACTCCCCT
GAACGTAGTA CCTTTCCACT GCAACTGTTT GGTTTCCATT ACAAATCCCG TACTCACTCG
ACCTACGGCA ACATTGATGT CCTGAAGGCT GCCTGCCGTC AGGAGGTGTG GATCAACCCT
ATAGACGCAC AGAAACGTGG GATTGCCAAC GGCGATATGG TGCGGGTGTA TAACCATCGT
GGCGAAGTTC GGCTACCAGC CAAAGTGACA CCACGCATTC TCCCTGGGGT TAGCGCTATG
GGCCAGGGAG CCTGGCACGA GGCCAATATG TCTGGCGATA AAATCGACCA TGGCGGATGT
GTGAATACGC TAACCACTCT GCGCCCTTCA CCACTGGCGA AGGGAAACCC GCAGCACACG
AATCTGGTCG AGATCGAAAA AATATAA
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| Protein sequence | MSKNERMVGI SRRTLVKSTA IGSLALAAGG FSLPFTLRSA AAAVQQASEQ VVWGACSVNC
GSRCALRLHV KDNEVAWVET DNTGSDEYGN HQVRACLRGR SIRRRINHPD RLNYPMKRVG
KRGEGKFERI SWDEALDTIA SSLKKTVEQY GNEAVYIQYS SGIVGGNITR SSPSASAVKR
LMNCYGGSLN QYGSYSTAQI SCAMPYTYGS NDGNSTTDIE NSKLVVMFGN NPAETRMSGG
GITYLLEKSR EKSNAKMIVI DPRYTDTAAG REDEWLPIRP GTDAALVAGI AWVLINENLV
DQPFLDKYCV GYDEKTLPAD APKNGHYKAY ILGEGDDKTA KTPQWASQIT GIPVDRIIKL
AREIGTAKPA YICQGWGPQR QANGELTARA IAMLPILTGN VGISGGNSGA RESTYTITIE
RLPVLDNPVK TSISCFSWTD AIDHGPQMTA IRDGVRGKDK LDVPIKFIWN YAGNTLVNQH
SDINKTHEIL QDESKCEMIV VIENFMTSSA KYADILLPDL MTVEQEDIIP NDYAGNMGYL
IFLQPVTSEK FERKPIYWIL SEVAKRLGPD VYQKFTEGRT QEQWLQHLYA KMLAKDPALP
SYDELKKMGI YKRKDPNGHF VAYKAFRDDP EANPLKTPSG KIEIYSSKLA EIARTWELEK
DEVISPLPVY ASTFEGWDSP ERSTFPLQLF GFHYKSRTHS TYGNIDVLKA ACRQEVWINP
IDAQKRGIAN GDMVRVYNHR GEVRLPAKVT PRILPGVSAM GQGAWHEANM SGDKIDHGGC
VNTLTTLRPS PLAKGNPQHT NLVEIEKI
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