Gene ECH74115_2249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2249 
Symbol 
ID6969543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2138486 
End bp2138851 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content56% 
IMG OID643386134 
ProductHNH endonuclease 
Protein accessionYP_002270621 
Protein GI209400253 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.00000074902 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTGTGC TTCGTACGTT ACCGGGCAGA ATCAAAACTC TGAACACCCG GCGGGTGAAT 
ATTCTGAAGG GTGAACAGCG TCGTGTCAGT GGCAGTGCAC GTGTTTCCCT CAAGCGTCAT
ATCTGGCTCA GGGATGCCGG GCAGTGCTGT CTCTGTGGTC GTGTGGTTGA CCTCTGTGAC
AGTGAACTCG ATCACCGAAT TGCACTTCAG TTCGGTGGTG GTAATGAGGA GACGAATCTC
TGGACGCTCT GTACCGAATG CCATCGACAA AAGTCTGCTC GTGAAGCGGC GGGTGGTATG
CCGGACCCGA CGCTGCCGGA GGTGTCCGGA GGTCATGGCA GGGCAGACGA TATCATCGGA
CTGTGA
 
Protein sequence
MAVLRTLPGR IKTLNTRRVN ILKGEQRRVS GSARVSLKRH IWLRDAGQCC LCGRVVDLCD 
SELDHRIALQ FGGGNEETNL WTLCTECHRQ KSAREAAGGM PDPTLPEVSG GHGRADDIIG
L