| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2231 |
|---|
| Symbol | |
|---|
| ID | 6970849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 2119838 |
|---|
| End bp | 2120437 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643386119 |
|---|
| Product | Ail/Lom family protein |
|---|
| Protein accession | YP_002270606 |
|---|
| Protein GI | 209400355 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3637] Opacity protein and related surface antigens |
|---|
| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.00000102188 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCGTAAAC TTTATGCCGC CATTTTGTCC GCAGCCATCT GTCTGGCCGT ATCCGGCGCG
CCTGCATGGG CGTCTGAGCA GCAGGCCACG CTGAGCGCGG GGTATCTTCA TGCCCGGACG
AGCGCTCCCG GTAGCGATAA TCTTAACGGG ATTAACGTGA AATACCGTTA TGAATTTACG
GACACGCTGG GGCTGGTGAC GTCATTCAGC TATGCAGGAG ACAAGAATCG CCAGCTTACC
CGTTACAGCG ATACCCGCTG GCATGAAGAT TCCGTGCGTA ACCGCTGGTT CAGCGTAATG
GCGGGGCCGT CTGTGCGCGT GAATGAATGG TTCAGCGCGT ATGCGATGGC GGGTGTGGCT
TACAGCCGTG TGTCGACTTT CTCCGGGGAT TATCTTCGCG TAACTGACAA CAAGGGGAAA
ACGCACGATG TGCTGACCGG AAGTGATGAC GGTCGCCACA GCAACACGTC TCTGGCGTGG
GGGGCTGGCG TGCAGTTTAA CCCGACCGAA TCCGTGGCCA TTGATATTGC TTATGAAGGC
TCCGGCAGTG GCGACTGGCG CACTGACGGT TTCATCGTGG GTGTCGGTTA TAAGTTCTGA
|
|---|
| Protein sequence | MRKLYAAILS AAICLAVSGA PAWASEQQAT LSAGYLHART SAPGSDNLNG INVKYRYEFT
DTLGLVTSFS YAGDKNRQLT RYSDTRWHED SVRNRWFSVM AGPSVRVNEW FSAYAMAGVA
YSRVSTFSGD YLRVTDNKGK THDVLTGSDD GRHSNTSLAW GAGVQFNPTE SVAIDIAYEG
SGSGDWRTDG FIVGVGYKF
|
|---|
| |