Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_2151 |
Symbol | |
ID | 6968539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 2063455 |
End bp | 2064345 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 643386046 |
Product | hypothetical protein |
Protein accession | YP_002270535 |
Protein GI | 209399358 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0685659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAGA AGACAACGGA AATTGATGCC ATCTTGTTAA ATCTCAATAA GGCTATCGAT GCCCACTATC AGTGGCTGGT GAGTATGTTT CACAGCGTGG TCGCGAGAGA TGCCAGTAAG CCAGAAATAA CGGATAACCA TTCTTATGGA CTGTGCCAGT TTGGTCGGTG GATTGATCAT CTGAGGCCAC TCGATAACGA TGAATTACCT TACGTTCGGC TAATGGATTC TGCCCATCAA CATATGCATA ATTGTGGTCG GGAATTAATG CTGGCTATTG TTGAAAATCA CTGGCAGGAC GCGCATTTCG ACGCCTTTCA GGAGGGGGTG CTTTCTTTTA CTGCGGCATT AACCGATTAC AAAATTTATT TGCTGACGAT CCGTAGCAAT ATGGATGTTT TGACGGGATT GCCGGGGCGT CGGGTTCTTG ATGAATCCTT TGATCATCAG TTACGCAACA CTGAGCCTCT GAATCTTTAT TTAATGTTGT TGGATATTGA CCGATTTAAA TTGGTTAATG ATACCTACGG GCATTTAATC GGCGATGTAG TATTACGCAC CCTGGCAACT TACTTAGCCA GTTGGACGCG TGATTACGAA ACGGTTTATC GCTACGGGGG CGAAGAATTT ATCATTATTG TCAAAGCGGC TAATGATGAA GAAGCATGTC GTGCAGGTGT CAGAATTTGC CAGTTAGTCG ATAACCATGC CATCACACAT TCTGAAGGGC ATATCAACAT TACCGTGACA GCAGGTGTGA GTCGCGCATT TCCTGAAGAG ACTCTGGATG TGGTCATTGG AAGAGCAGAC CGGGCAATGT ATGAGGGTAA GCAAACCGGA AGAAATCGCT GCATGTTTAT TGACGAACAA AATGTGATTA ACCGAGTTTA A
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Protein sequence | MIKKTTEIDA ILLNLNKAID AHYQWLVSMF HSVVARDASK PEITDNHSYG LCQFGRWIDH LRPLDNDELP YVRLMDSAHQ HMHNCGRELM LAIVENHWQD AHFDAFQEGV LSFTAALTDY KIYLLTIRSN MDVLTGLPGR RVLDESFDHQ LRNTEPLNLY LMLLDIDRFK LVNDTYGHLI GDVVLRTLAT YLASWTRDYE TVYRYGGEEF IIIVKAANDE EACRAGVRIC QLVDNHAITH SEGHINITVT AGVSRAFPEE TLDVVIGRAD RAMYEGKQTG RNRCMFIDEQ NVINRV
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