Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_2148 |
Symbol | |
ID | 6971139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 2060344 |
End bp | 2061531 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643386043 |
Product | putative MFS-type transporter YdeE |
Protein accession | YP_002270532 |
Protein GI | 209398928 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.355886 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACTTAT CCCTACGACG CTCTACCAGC GCCCTTCTTG CCTCGTCGTT GTTATTAACC ATCGGACGCG GCGCCACGCT GCCATTTATG ACCATTTACT TGAGTCGCCA GTACAGCCTG AGTGTCGATC TAATCGGTTA TGCGATGACA ATTGCGCTCA CTATTGGCGT CGTTTTTAGC CTCGGTTTTG GTATCCTGGC GGATAAGTTC GACAAGAAAC GCTATATGTT ACTGGCAATT ACCGCCTTCG CCAGCGGTTT TATTGCCATT CCTTTAGTGA ATAACGTGAC GCTGGTGGTG CTCTTTTTTG CCCTCATTAA CTGCGCCTAT TCCGTTTTTG CTACCGTGCT GAAAGCCTGG TTTGCCGACA ATCTTTCATC CACCAGCAAA ACGAAGATCT TCTCGATCAA CTACACCATG CTCAATATTG GCTGGACCGT CGGCCCGCCA CTCGGCACGC TGTTGGTCAT GCAGAGCATC AATCTGCCCT TTTGGCTGGC CGCTATCTGC TCTGCGTTTC CCATGTTTTT CATTCAAATT TGGGTAAAGC GCAGCGAGAA AATCATCGCC ACGGAAACAG GCAGTGTCTG GTCGCCGAAA GTTTTATTAC AAGATAAGGC ACTGTTGTGG TTTACCTGCT CTGGCTTTCT GGCTTCTTTT GTTAGTGGCG CATTTGCTTC ATGCATTTCA CAATATGTGA TGGTGATTGC TGATGGTGAT TTTGCCGAAA AGGTGGTCGC GGTTGTTCTT CCAGTGAATG CTGCCATGGT GGTTACGTTG CAATATTCCG TGGGCCGCCG CCTTAACCCG GCTAACATCC GCGCGCTGAT GACAGCAGGC ACCCTCTGTT TCGTCATCGG TCTGATCGGT TTTATTTTTT CCGGCAACAG CCTGCTATTG TGGGGTATGT CAGCTGCGGT ATTTACTGTC GGTGAAATAA TTTATGCGCC GGGCGAGTAT ATGTTGATTG ACCATATTGC GCCGCCAGGA ATGAAAGCCA GCTATTTTTC CGCCCAGTCA TTAGGCTGGT TGGGCGCAGC GGTAAATCCA TTAGTGAGTG GTGTTGTACT TACCACTCTC CCGTCGTCTT CGCTGTTTAT CATTCTGGCG TTAGTCATCA TTGCCGCGTG GGCGCTGATG TTAAAAGGTA TTAACGCCAG ACCCCAGAGG CAACCAGCAC TCTGTTGA
|
Protein sequence | MNLSLRRSTS ALLASSLLLT IGRGATLPFM TIYLSRQYSL SVDLIGYAMT IALTIGVVFS LGFGILADKF DKKRYMLLAI TAFASGFIAI PLVNNVTLVV LFFALINCAY SVFATVLKAW FADNLSSTSK TKIFSINYTM LNIGWTVGPP LGTLLVMQSI NLPFWLAAIC SAFPMFFIQI WVKRSEKIIA TETGSVWSPK VLLQDKALLW FTCSGFLASF VSGAFASCIS QYVMVIADGD FAEKVVAVVL PVNAAMVVTL QYSVGRRLNP ANIRALMTAG TLCFVIGLIG FIFSGNSLLL WGMSAAVFTV GEIIYAPGEY MLIDHIAPPG MKASYFSAQS LGWLGAAVNP LVSGVVLTTL PSSSLFIILA LVIIAAWALM LKGINARPQR QPALC
|
| |