Gene ECH74115_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2148 
Symbol 
ID6971139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2060344 
End bp2061531 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content50% 
IMG OID643386043 
Productputative MFS-type transporter YdeE 
Protein accessionYP_002270532 
Protein GI209398928 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.355886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTAT CCCTACGACG CTCTACCAGC GCCCTTCTTG CCTCGTCGTT GTTATTAACC 
ATCGGACGCG GCGCCACGCT GCCATTTATG ACCATTTACT TGAGTCGCCA GTACAGCCTG
AGTGTCGATC TAATCGGTTA TGCGATGACA ATTGCGCTCA CTATTGGCGT CGTTTTTAGC
CTCGGTTTTG GTATCCTGGC GGATAAGTTC GACAAGAAAC GCTATATGTT ACTGGCAATT
ACCGCCTTCG CCAGCGGTTT TATTGCCATT CCTTTAGTGA ATAACGTGAC GCTGGTGGTG
CTCTTTTTTG CCCTCATTAA CTGCGCCTAT TCCGTTTTTG CTACCGTGCT GAAAGCCTGG
TTTGCCGACA ATCTTTCATC CACCAGCAAA ACGAAGATCT TCTCGATCAA CTACACCATG
CTCAATATTG GCTGGACCGT CGGCCCGCCA CTCGGCACGC TGTTGGTCAT GCAGAGCATC
AATCTGCCCT TTTGGCTGGC CGCTATCTGC TCTGCGTTTC CCATGTTTTT CATTCAAATT
TGGGTAAAGC GCAGCGAGAA AATCATCGCC ACGGAAACAG GCAGTGTCTG GTCGCCGAAA
GTTTTATTAC AAGATAAGGC ACTGTTGTGG TTTACCTGCT CTGGCTTTCT GGCTTCTTTT
GTTAGTGGCG CATTTGCTTC ATGCATTTCA CAATATGTGA TGGTGATTGC TGATGGTGAT
TTTGCCGAAA AGGTGGTCGC GGTTGTTCTT CCAGTGAATG CTGCCATGGT GGTTACGTTG
CAATATTCCG TGGGCCGCCG CCTTAACCCG GCTAACATCC GCGCGCTGAT GACAGCAGGC
ACCCTCTGTT TCGTCATCGG TCTGATCGGT TTTATTTTTT CCGGCAACAG CCTGCTATTG
TGGGGTATGT CAGCTGCGGT ATTTACTGTC GGTGAAATAA TTTATGCGCC GGGCGAGTAT
ATGTTGATTG ACCATATTGC GCCGCCAGGA ATGAAAGCCA GCTATTTTTC CGCCCAGTCA
TTAGGCTGGT TGGGCGCAGC GGTAAATCCA TTAGTGAGTG GTGTTGTACT TACCACTCTC
CCGTCGTCTT CGCTGTTTAT CATTCTGGCG TTAGTCATCA TTGCCGCGTG GGCGCTGATG
TTAAAAGGTA TTAACGCCAG ACCCCAGAGG CAACCAGCAC TCTGTTGA
 
Protein sequence
MNLSLRRSTS ALLASSLLLT IGRGATLPFM TIYLSRQYSL SVDLIGYAMT IALTIGVVFS 
LGFGILADKF DKKRYMLLAI TAFASGFIAI PLVNNVTLVV LFFALINCAY SVFATVLKAW
FADNLSSTSK TKIFSINYTM LNIGWTVGPP LGTLLVMQSI NLPFWLAAIC SAFPMFFIQI
WVKRSEKIIA TETGSVWSPK VLLQDKALLW FTCSGFLASF VSGAFASCIS QYVMVIADGD
FAEKVVAVVL PVNAAMVVTL QYSVGRRLNP ANIRALMTAG TLCFVIGLIG FIFSGNSLLL
WGMSAAVFTV GEIIYAPGEY MLIDHIAPPG MKASYFSAQS LGWLGAAVNP LVSGVVLTTL
PSSSLFIILA LVIIAAWALM LKGINARPQR QPALC