Gene ECH74115_2134 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2134 
SymboluxaB 
ID6966726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2047742 
End bp2049193 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content52% 
IMG OID643386031 
Productaltronate oxidoreductase 
Protein accessionYP_002270520 
Protein GI209396611 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0246] Mannitol-1-phosphate/altronate dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.153738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAACAC TAAATCGTCG CGATTTTCCC GGTGCACAGT ATCCAGAACG TATCATTCAG 
TTTGGTGAAG GTAACTTCCT GCGCGCCTTT GTTGACTGGC AAATAGATCT CCTGAATGAG
CACACCGATC TGAATTCTGG TGTGGTCGTT GTTCGTCCGA TTGAAACTTC ATTCCCGCCG
TCACTGAGCA CGCAGGATGG TCTGTACACC ACCATTATCC GTGGCCTGAA TGAGAAGGGG
GAAGCGGTCA GCGACGCGCG TCTGATTCGC TCTGTTAATC GTGAAATCAG CGTCTACAGT
GAATACGATG AATTCCTGAA ACTGGCGCAC AACCCGGAAA TGCGCTTTGT TTTCTCTAAC
ACCACCGAAG CGGGTATCAG CTACCATGCG GGCGATAAAT TCGATGACGC GCCAGCGGTA
AGTTATCCGG CAAAACTGAC CCGTCTGCTG TTCGAACGTT TTAGCCATTT CAACGGTGCG
CTGGATAAAG GTTGGATCAT CATCCCGTGT GAGTTGATCG ACTACAATGG CGACGCGTTG
CGTGAACTGG TGCTGCGCTA TGCGCAAGAG TGGGCACTGC CAGAAGCATT TATTCAATGG
CTGGATCAGG CTAACAGCTT CTGTTCTACG CTGGTGGACC GTATCGTTAC CGGTTATCCG
CGTGATGAAG TGGCTAAACT GGAAGAAGAA CTGGGTTATC ACGATGGTTT CCTCGACACC
GCTGAACACT TTTACTTGTT TGTGATTCAG GGACCGAAAT CCTTAGCGAC CGAGCTGCGT
CTGGACAAAT ATCCGCTCAA CGTGCTGATT GTTGACGATA TTAAACCGTA TAAAGAACGC
AAAGTGGCAA TACTCAACGG TGCACACACC GCGTTGGTGC CGGTGGCGTT CCAGGCAGGG
CTGGATACCG TAGGTGAAGC GATGAACGAT GCTGAAATTT GCGCATTCGT TGAAAAAGCC
ATCTACGAAG AAATTATTCC GGTACTGGAT TTGCCACGCG ATGAACTGGA ATCTTTCGCC
AGTGCAGTCA CCGGGCGTTT CCGTAACCCG TACATTAAGC ATCAGCTGCT GTCTATCGCG
CTCAACGGTA TGACCAAGTT CCGTACCCGC ATCCTGCCGC AGCTGCTGGC AGGGCAGAAG
GCAAACGGCA CACTTCCGGC GCGCCTTACT TTCGCATTAG CGGCATTGAT TGCGTTCTAT
CGCGGTGAGC GTAATGGAGA AACATATCCG GTACAGGACG ATGCACACTG GCTGGAACGT
TATCAGCAAC TCTGGAGTCA GCATCGTGAC CGTGTTATCG GTACCCAGGA ACTGGTAGCG
ATTGTGTTGG CAGAAAAAGA CCACTGGGAG CAGGACCTGA CGCAAGTGCC TGGTCTGGTC
GAGCAGGTGG CTAATGACCT GGATGCGATT CTCGAAAAAG GGATGCGCGA AGCTGTACGT
CCGTTGTGCT AA
 
Protein sequence
MKTLNRRDFP GAQYPERIIQ FGEGNFLRAF VDWQIDLLNE HTDLNSGVVV VRPIETSFPP 
SLSTQDGLYT TIIRGLNEKG EAVSDARLIR SVNREISVYS EYDEFLKLAH NPEMRFVFSN
TTEAGISYHA GDKFDDAPAV SYPAKLTRLL FERFSHFNGA LDKGWIIIPC ELIDYNGDAL
RELVLRYAQE WALPEAFIQW LDQANSFCST LVDRIVTGYP RDEVAKLEEE LGYHDGFLDT
AEHFYLFVIQ GPKSLATELR LDKYPLNVLI VDDIKPYKER KVAILNGAHT ALVPVAFQAG
LDTVGEAMND AEICAFVEKA IYEEIIPVLD LPRDELESFA SAVTGRFRNP YIKHQLLSIA
LNGMTKFRTR ILPQLLAGQK ANGTLPARLT FALAALIAFY RGERNGETYP VQDDAHWLER
YQQLWSQHRD RVIGTQELVA IVLAEKDHWE QDLTQVPGLV EQVANDLDAI LEKGMREAVR
PLC