Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_2130 |
Symbol | lsrF |
ID | 6972193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 2044623 |
End bp | 2045498 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643386027 |
Product | aldolase |
Protein accession | YP_002270516 |
Protein GI | 209398692 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1830] DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGATT TAGACGATAT TAAAGATGGT AAAGATTTTC GTACCGATCA ACCGCAAAAA AATATCCCTT TTACCCTGAA AGGTTGCGGT GCGCTGGATT GGGGAATGCA GTCACGCTTA TCGCGGATAT TTAATCCGAA AACGGGTAAA ACCGTGATGC TGGCTTTTGA CCATGGTTAT TTTCAGGGAC CAACTACCGG ACTTGAACGC ATTGATATAA ATATCGCCCC GCTGTTTGAA CATGCCGATG TATTAATGTG TACGCGCGGG ATTTTGCGCA GCGTAGTTCC CCCGGCGACC AATAAGCCGG TGGTACTGCG GGCGTCAGGT GCGAACTCTA TCCTGGCGGA ATTAAGCAAT GAAGCCGTGG CGTTATCGAT GGATGACGCC GTGCGCCTGA ACAGTTGCGC GGTGGCGGCG CAGGTTTATA TCGGCAGCGA ATATGAACAT CAGTCGATCA AAAATATTAT TCAGCTGGTC GATGCCGGAA TGAAAGTGGG AATGCCGACC ATGGCCGTGA CTGGCGTGGG CAAAGACATG GTGCGCGATC AGCGTTATTT CTCGCTCGCG ACTCGAATCG CCGCTGAAAT GGGGACGCAA ATTATCAAAA CCTATTATGT CGAAAAAGGT TTTGAACGGA TTGTTGCCGG ATGTCCGGTA CCCATTGTTA TTGCTGGCGG TAAAAAATTA CCGGAGCGCG AGGCGCTGGA AATGTGCTGG CAGGCTATCG ATCAGGGCGC TTCTGGTGTG GATATGGGGC GTAATATTTT CCAGTCTGAC CATCCGGTGG CGATGATGAA AGCCGTACAG GCGGTGGTTC ACCATAACGA AACGGCTGAT CGGGCATATG AACTCTATCT GAGTGAAAAA CAGTAA
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Protein sequence | MADLDDIKDG KDFRTDQPQK NIPFTLKGCG ALDWGMQSRL SRIFNPKTGK TVMLAFDHGY FQGPTTGLER IDINIAPLFE HADVLMCTRG ILRSVVPPAT NKPVVLRASG ANSILAELSN EAVALSMDDA VRLNSCAVAA QVYIGSEYEH QSIKNIIQLV DAGMKVGMPT MAVTGVGKDM VRDQRYFSLA TRIAAEMGTQ IIKTYYVEKG FERIVAGCPV PIVIAGGKKL PEREALEMCW QAIDQGASGV DMGRNIFQSD HPVAMMKAVQ AVVHHNETAD RAYELYLSEK Q
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