| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2126 |
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| Symbol | lsrA |
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| ID | 6968979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 2040013 |
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| End bp | 2041548 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643386023 |
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| Product | autoinducer-2 ABC transporter, ATP-binding protein LsrA |
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| Protein accession | YP_002270512 |
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| Protein GI | 209395735 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACGA GTGATACCCG CGCGTTACCG CTACTTTGCG CCCGCTCGGT TTATAAACAG
TATTCAGGGG TCAATGTCCT GAAAGGCATC GATTTTACGT TGCATCAGGG GGAGGTCCAC
GCCCTGCTCG GCGGCAATGG TGCCGGTAAA TCGACGTTAA TGAAGATTAT TGCCGGTATT
ACCTCTGCTG ATAGCGGTAC GCTGGAGATT GGGGGCAACA ACTACGCCAG ATTAACGCCA
GTTCATGCTC ATCAGCTGGG TATTTATCTC GTTCCCCAGG AACCGCTGCT TTTCCCAAGC
CTGTCGATAA AAGAAAACAT CCTGTTTGGG CTGGCAAAAA AACAGCTCTC CATGCAGAAA
ATGAAGAACT TGCTGGCGGC GCTGGGCTGC CAGTTTGATC TGCATAGTCT GGCAGGATCG
CTGGATGTCG CCGATCGCCA AATGGTGGAA ATCCTCCGCG GGCTGATGCG CGACTCGCGG
ATTCTGATCC TCGATGAACC TACCGCCTCG CTTACCCCTG CGGAAACCGA ACGCTTGTTT
ACTCGCTTGC AAGAGCTGCT TGCTACTGGC GTGGGTATTG TTTTTATCTC GCATAAGCTG
CCGGAAATTC GCCAGATTGC CGATCGGATT AGCGTGATGC GCGACGGAAC CATCGCCTTA
AGCGGCAAAA CCAGCGAACT GTCTACCGAC GACATTATTC AGGCCATCAC CCCAGCGGTA
CGGGAAAAAT CGCTCTCTGC CAGCCAAAAA TTATGGCTGG AGTTACCTGG CAACCGCCCA
CAACATGCCG CAGGAACGTC GGTGCTGACA CTGGAAAATC TGACTGGCGA AGGTTTCAGG
AATGTCAGCC TGACGCTAAA TGCCGGAGAA ATTCTGGGTC TGGCTGGGCT GGTGGGTGCC
GGACGCACAG AACTGGCCGA GACGCTCTAT GGTCTACGTA CTTTGCGTGG CGGACGCATT
ATGCTGAATG ATAAAGAGAT CAATAGATTA TCCACTGGAG AACGTTTACT GCGCGGTCTG
GTTTATCTGC CGGAAGATCG CCAGTCATCC GGACTGAATC TCGATGCTTC GCTGGCCTGG
AACGTCTGCG CCCTTACTCA TAACCTTCGT GGATTCTGGG CGAAAACCGC GAAAGATAAT
GCCACCCTGG AACTTTATCG TCGGGCGCTG AATATTAAAT ATAACCAACC GGAACAAGCT
GCACGGACAT TATCCGGTGG TAACCAGCAA AAAATCCTGA TTGCCAAATG CCTGGAAGCC
TCGCCGCAAG TATTGATTGT CGATGAGCCG ACGCGCGGCG TGGATGTCTC GGCGCGTAAT
GATATCTACC AACTGTTGCG CAGCATCGCC GCACAGAATG TGGCTGTGCT GCTTATCTCC
TCTGATCTGG AAGAGATCGA ACTGATGGCA GATCGTGTGT ATGTGATGCA TCAGGGCGAA
ATTACCCACT CTGCACTGAC CGGGCGCGAT ATTAATGTCG AGACTATTAT GCGCGTTGCC
TTCGGCGATA GTCAGCGTCA GGAGGCGGCA TGCTGA
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| Protein sequence | MQTSDTRALP LLCARSVYKQ YSGVNVLKGI DFTLHQGEVH ALLGGNGAGK STLMKIIAGI
TSADSGTLEI GGNNYARLTP VHAHQLGIYL VPQEPLLFPS LSIKENILFG LAKKQLSMQK
MKNLLAALGC QFDLHSLAGS LDVADRQMVE ILRGLMRDSR ILILDEPTAS LTPAETERLF
TRLQELLATG VGIVFISHKL PEIRQIADRI SVMRDGTIAL SGKTSELSTD DIIQAITPAV
REKSLSASQK LWLELPGNRP QHAAGTSVLT LENLTGEGFR NVSLTLNAGE ILGLAGLVGA
GRTELAETLY GLRTLRGGRI MLNDKEINRL STGERLLRGL VYLPEDRQSS GLNLDASLAW
NVCALTHNLR GFWAKTAKDN ATLELYRRAL NIKYNQPEQA ARTLSGGNQQ KILIAKCLEA
SPQVLIVDEP TRGVDVSARN DIYQLLRSIA AQNVAVLLIS SDLEEIELMA DRVYVMHQGE
ITHSALTGRD INVETIMRVA FGDSQRQEAA C
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