| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2119 |
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| Symbol | |
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| ID | 6967349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | - |
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| Start bp | 2027393 |
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| End bp | 2028103 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643386017 |
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| Product | periplasmic pilus chaperone family protein |
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| Protein accession | YP_002270506 |
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| Protein GI | 209399101 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.423034 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACTA CGCGTACCCC CTACTCTATT TCCTTTATGG CGACAGTGTT ACTTTTATTG
CTCTTTGCTT GCCATAGCAC CGTTGCCAAC GCAGCTGTCG CACTGGGTGC GACGCGGGTA
ATTTATCCGG CAAACCAGAA ACAGGTTTTA TTGCCTGTCA CGAATAATGA TCCTGCCAGT
GTCTATCTCA TTCAGTCATG GATAGAAAAT GCTGGTGACC AAAAAGACAC CCAGTTTGTC
ATTACCCCAC CTCTTTTTTC CATGCAAGGT AAAAAAGAGA ATACGCTGCG GATAATCAAC
GCCACTAATC ATCAGTTACC CGGCGACCGT GAAAGCCTGT TCTGGGTTAA TGTTAAAGCT
ATTCCTGCTA TGGAAAAAGA CCAGAAGAAT GAGAATACAT TACAGCTGGC AATTATTAGC
CGCATAAAAA TGTTTTATCG GCCCACGAAC CTGGCAATGG CACCTGAAGA AGCGCCTGCA
ATGCTTCGGT TTCGTCGCAG CGGTAGCAAT CTCACTCTTA TTAATCCAAC GCCCTACTTC
ATTACCGTAA CAAATATGAA AGCAGGAAAT AGCAATCTCC CAAACACCAT GGTGCCGCCA
AAAGGTGAAG TGTCGGTGGA TATCCCGCAT GCTGCCACCG GGGATATCAG TTTTCAGACG
ATCAATGATT ACGGCGCATT AACTCCGCGT ATTAAGGCAA CCATGCAGTA A
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| Protein sequence | MQTTRTPYSI SFMATVLLLL LFACHSTVAN AAVALGATRV IYPANQKQVL LPVTNNDPAS
VYLIQSWIEN AGDQKDTQFV ITPPLFSMQG KKENTLRIIN ATNHQLPGDR ESLFWVNVKA
IPAMEKDQKN ENTLQLAIIS RIKMFYRPTN LAMAPEEAPA MLRFRRSGSN LTLINPTPYF
ITVTNMKAGN SNLPNTMVPP KGEVSVDIPH AATGDISFQT INDYGALTPR IKATMQ
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