Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_2107 |
Symbol | pqqL |
ID | 6970514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 2008252 |
End bp | 2011035 |
Gene Length | 2784 bp |
Protein Length | 927 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643386006 |
Product | peptidase, M16B family |
Protein accession | YP_002270495 |
Protein GI | 209398793 |
COG category | [R] General function prediction only |
COG ID | [COG0612] Predicted Zn-dependent peptidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.224289 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGAAACC TCTGTTTCTT ACTGACGTTA GTGGCAACTC TGTTGCTCCC CGGGCGGCTG ATTGCCGCCG CCTTACCGCA GGATGAAAAG TTAATTACCG GGCAACTGGA CAATGGCTTG CGATATATGA TTTATCCGCA TGCTCATCCA AAGGATCAGG TAAATTTATG GCTGCAAATT CATACCGGTT CATTGCAGGA AGAAGACAAT GAGCGCGGCG TGGCTCATTT TGTAGAACAT ATGATGTTTA ACGGCACAAA AACATGGCCG GGTAATAAAG TCATCGAAAC ATTTGAGTCA ATGGGCCTGC GTTTTGGTCG CGATGTTAAT GCCTATACCA GCTATGACGA AACGGTGTAT CAGGTGAGTT TGCCAACTAC GCAGAAACAA AATCTGCAAC AAGTGATGGC AATCTTCAGT GAATGGAGTA ATGCCGCAAC CTTTGAAAAA CTCGAAGTAG ACGCTGAACG CGGCGTAATT ACTGAGGAAT GGCGTGCCCA TCAGGATGCG AAATGGCGCA CCTCTCAGGC GCGCCGCCCT TTCCTGCTGG CAAATACCCG TAATTTAGAC CGTGAACCTA TCGGCCTGAT GGATACTGTC GCCACGGTCA CACCGGCACA ATTGCTCCAA TTTTATCAAC GCTGGTATCA ACCAAATAAT ATGACCTTTA TCGTGGTTGG CGATATCGAC AGTAAAGAAG CGCTGGCGCT GATAAAGGAT AATTTAAGTA AGCTTCCGGC TAACAAAGCA GCTGAAAATC GCGTCTGGCC GACAAAAGCC GAAAACCACC TGCGCTTTAA TATCATTAAT GATAAAGAAA ACCGGGTGAA CGGCATCGCA CTCTATTATC GCCTGCCAAT GGTACAAGTG AACGATGAGC AAAGCTTTAT CGAACAAGCT GAATGGAGCA TGTTAGTTCA GCTGTTCAAT CAACGTCTGC AGGAACGTAT ACAGTCGGGC GAGTTGAAGA CTATTTCTGG CGGCACTGCG CGCAGCGTTA AAATTGCACC CGATTATCAG TCGCTGTTTT TCCGTGTAAA TGCACGAGAC GATAATATGC AGGATGCTGC GAATGCATTA ATGGAAGAGT TGGCAACCAT TGATCAGCAT GGTTTTTCTG CTGAAGAACT CGATGATGTC AAATCTACCC GCCTCACCTG GCTGAAAAAT GCGGTTGATC AGCAAGCTGA ACGTGATTTA CGTATGCTGA CCAGTCGCCT GGCATCCAGC TCATTAAATA ATACGCCGTT CTTGTCGCCG GAAGAGACAT ATCAACTTTC GAAACGTCTG TGGCAGCAAA TTACCGTGCA AAGTCTGGCG GAAAAATGGC AGCAGTTAAG AAAGAACCAG GACGCATTTT GGGAGCAAAT GGTAAACAAT GAGGTTGCCG CCAAAAAAGC ATTGTCTCCT GCGGCTATCC TGGCGCTGGA AAAGGAGTAC GCCAACAAAA AGCTGGCGGC TTACATCTTC CCAGGCAGAA ATTTATCGTT AACAGTAGAC GCTGACCCAC AGGCGGAAAT TAGCAGCAAA GAAACGCTGG CTGAGAATCT GACATCATTA ACACTTTCCA ATGGTGCAAG GGTTATTCTG GCAAAATCCG CGGGTGAAGA GCAAAAGCTA CAAATTATTG CCGTATCGAA TAAAGGCGAT TTAAGTTTCC CTGCGCAGCA AAAATCACTT ATCGCGCTGG CAAATAAAGC AGTTAGCGGA AGCGGCGTTG GCGAACTCTC CTCTTCCAGC CTGAAACGCT GGAGTGCGGA AAACTCGGTA ACCATGAGCA GTAAAGTCAG TGGCATGAAT ACGTTGCTCT CCGTTAGCGC GCGGACTAAT AACCCTGAAC CTGGTTTTCA GTTGATTAAC CAGCGAATCA CCCACAGCAC GATTAACGAC AATATTTGGG CATCGCTACA AAATGCTCAA ATTCAGGCAT TGAAAACGCT CGACCAGCGT CCAGCGGAGA AATTCGCCCA GCAGATGTAT GAGACGCGCT ATGCTGATGA CCGCACGAAA TTACTGCAAG AAAATCAGAT TGCACAGTTT ACTGCCGCAG ATGCGCTGGC TGCCGATCGC CAGTTGTTTT CATCTCCAGC GGATATCACG TTTGTCATTG TCGGTAATGT CGCAGAAGAC AAACTCGTGG CGTTAATTAC GCGTTACTTA GGATCAATCA AACACTCTGA TTCGCCATTA GCCGCAGGTA AACCATTAAC TCGCGCGACG GACAACGCAT CGGTTACTGT AAAGGAACAA AATGAACCTG TGGCACAGGT TTCACAGTGG AAGCGTTATG ATTCCCGGAC ACCTGTTAAT CTGGCGACGC GTATGGCGCT CGATGCTTTT AACGTCGCAC TGGCAAAAGA TCTACGCGTT AATATTCGTG AACAGGCATC TGGGGCATAC AGCGTTTCTT CTCGCCTCTC GGTTGATCCT CAGGCTAAAG ATATCAGTCA TTTGCTGGCT TTTACTTGTC AACCAGAACG ACATGATGAA CTGTTAACGT TAGCGAATGA AGTGATGGTT AAGCGTTTGA CTAAAGGGAT CAGTGAGCAA GAACTGAACG AATACCAGCA AAACGTTCAG CGCAGCCTCG ATATCCAACA GCGTAGCGTT CAACAATTAG CGAACACTAT TGTAAATAGT CTTATTCAAT ATGACGATCC TGCAGCATGG ACTGAGCAGG AGCAATTGTT GAAACAAATG ACGGTAGAGA ATGTTAACAC TGCCGTTAAA CAATATCTTT CTCATCCGGT AAATACTTAT ACCGGAGTAT TATTGCCAAA ATAA
|
Protein sequence | MRNLCFLLTL VATLLLPGRL IAAALPQDEK LITGQLDNGL RYMIYPHAHP KDQVNLWLQI HTGSLQEEDN ERGVAHFVEH MMFNGTKTWP GNKVIETFES MGLRFGRDVN AYTSYDETVY QVSLPTTQKQ NLQQVMAIFS EWSNAATFEK LEVDAERGVI TEEWRAHQDA KWRTSQARRP FLLANTRNLD REPIGLMDTV ATVTPAQLLQ FYQRWYQPNN MTFIVVGDID SKEALALIKD NLSKLPANKA AENRVWPTKA ENHLRFNIIN DKENRVNGIA LYYRLPMVQV NDEQSFIEQA EWSMLVQLFN QRLQERIQSG ELKTISGGTA RSVKIAPDYQ SLFFRVNARD DNMQDAANAL MEELATIDQH GFSAEELDDV KSTRLTWLKN AVDQQAERDL RMLTSRLASS SLNNTPFLSP EETYQLSKRL WQQITVQSLA EKWQQLRKNQ DAFWEQMVNN EVAAKKALSP AAILALEKEY ANKKLAAYIF PGRNLSLTVD ADPQAEISSK ETLAENLTSL TLSNGARVIL AKSAGEEQKL QIIAVSNKGD LSFPAQQKSL IALANKAVSG SGVGELSSSS LKRWSAENSV TMSSKVSGMN TLLSVSARTN NPEPGFQLIN QRITHSTIND NIWASLQNAQ IQALKTLDQR PAEKFAQQMY ETRYADDRTK LLQENQIAQF TAADALAADR QLFSSPADIT FVIVGNVAED KLVALITRYL GSIKHSDSPL AAGKPLTRAT DNASVTVKEQ NEPVAQVSQW KRYDSRTPVN LATRMALDAF NVALAKDLRV NIREQASGAY SVSSRLSVDP QAKDISHLLA FTCQPERHDE LLTLANEVMV KRLTKGISEQ ELNEYQQNVQ RSLDIQQRSV QQLANTIVNS LIQYDDPAAW TEQEQLLKQM TVENVNTAVK QYLSHPVNTY TGVLLPK
|
| |