Gene ECH74115_2104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2104 
Symbol 
ID6967012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp2003350 
End bp2004564 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content53% 
IMG OID643386003 
Productputative lipoprotein 
Protein accessionYP_002270492 
Protein GI209396682 
COG category[S] Function unknown 
COG ID[COG1649] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.50348 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACAC CACCAGCGGG TTCAAAGCCA CCAGCCACGA CGCAACAATC GTCACAACCG 
ATGCGTGGCA TCTGGCTGGC CACGGTGTCT CGCCTCGACT GGCCACCGGT TTCCTCGGTT
AACATTAGTA ACCCCACCAG CCGGGCCCGT GTACAACAAC AGGCGATGAT CGACAAACTG
GATCATTTGC AACGTCTCGG TATAAACACG GTCTTTTTCC AGGTCAAGCC GGACGGTACC
GCCCTGTGGC CATCGAAAAT TTTGCCGTGG TCCGATCTTA TGACCGGTAA GATTGGTGAA
AATCCGGGTT ACGATCCGCT GCAATTTATG CTCGACGAAG CCCACAAGCG TGGGATGAAA
GTACACGCCT GGTTTAACCC CTATCGCGTA TCGGTTAATA CGAAGCCCGG TACTATCAGG
GAACTGAATA GCACTCTGTC TCAACAACCG GCGAGCGTCT ATGTGCAACA CCGTGACTGG
ATCAGAACGT CTGGCGATCG CTTTGTCCTC GACCCGGGCA TCCCTGAGGT TCAGGACTGG
ATCACATCAA TAGTCGCAGA AGTGGTTTCC CGCTATCCGG TAGATGGCGT GCAGTTTGAC
GACTATTTCT ATACTGAGTC ACCGGGTTCA CGGCTAAATG ATAACGAAAC GTACCGTAAA
TACGGAGGCG CATTTGCGTC AAAAGCAGAC TGGCGGCGCA ACAATACTCA GCAGTTAATT
GCAAAGGTAT CGCACACCAT TAAAAGCATT AAGCCGGGAG TCGAATTTGG TGTTAGCCCG
GCAGGCGTGT GGCGTAACCG ATCACACGAT CCGCTCGGTT CCGATACCCG AGGCGCGGCA
GCCTATGACG AATCCTACGC TGACACTCGT CGATGGGTGG AACAAGGATT GCTGGATTAC
ATTGCTCCCC AAATTTACTG GCCGTTCTCA CGGAGTGCCG CGCGTTATGA CGTGTTGGCA
AAATGGTGGG CGGATGTCGT TAAACCGACC AGGACCCGCC TGTATATCGG TATCGCCTTC
TATAAAGTGG GTGAACCTTC AAAGATAGAG CCAGACTGGA TGATTAACGG CGGCGTACCG
GAGCTGAAAA AGCAGCTCGA TCTTAACGAT GCGGTACCAG AAATTAGCGG CACCATCTTG
TTCCGTGAGG ACTATCTGAA TAAACCGCAG ACTCAACAAG CGGTCAGCTA TCTGCAAAGT
CGTTGGGGCA GTTAA
 
Protein sequence
MVTPPAGSKP PATTQQSSQP MRGIWLATVS RLDWPPVSSV NISNPTSRAR VQQQAMIDKL 
DHLQRLGINT VFFQVKPDGT ALWPSKILPW SDLMTGKIGE NPGYDPLQFM LDEAHKRGMK
VHAWFNPYRV SVNTKPGTIR ELNSTLSQQP ASVYVQHRDW IRTSGDRFVL DPGIPEVQDW
ITSIVAEVVS RYPVDGVQFD DYFYTESPGS RLNDNETYRK YGGAFASKAD WRRNNTQQLI
AKVSHTIKSI KPGVEFGVSP AGVWRNRSHD PLGSDTRGAA AYDESYADTR RWVEQGLLDY
IAPQIYWPFS RSAARYDVLA KWWADVVKPT RTRLYIGIAF YKVGEPSKIE PDWMINGGVP
ELKKQLDLND AVPEISGTIL FREDYLNKPQ TQQAVSYLQS RWGS