Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_2098 |
Symbol | yddR |
ID | 6969046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | - |
Start bp | 1995750 |
End bp | 1996772 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643385999 |
Product | inner membrane ABC transporter permease protein yddR |
Protein accession | YP_002270488 |
Protein GI | 209399112 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCTTCT GGAGTATTTT ACGCCAACGC TGCTGGGGGC TGGTGCTCGT GGTGGCGGGC GTCTGCGTGA TTACGTTTAT TATCTCGCAT CTGATCCCCG GCGATCCGGC GCGGTTACTG GCGGGTGACC GCGCCAGCGA TGCTATCGTG GAAAATATTC GCCAGCAACT GGGACTGGAC CAGCCACTGT ATGTACAGTT TTACCGCTAC GTCAGCGACC TGTTTCATGG TGACCTGGGA ACATCCATTC GTACTGGGCG TCCGGTGCTG GAAGAGTTGC GTATATTTTT CCCGGCGACG CTGGAGCTGG CTTTTTGTGC CCTGCTGCTG GCACTCTTGA TTGGCATCCC GCTGGGCATA CTCTCTGCAG TCTGGCGAAA TCGCTGGCTG GATCATCTGG TGCGAATAAT GGCGATTACC GGAATCTCCA CACCTGCGTT CTGGCTTGGG CTGGGCGTCA TCGTGCTGTT TTATGGTCAT CTGCAAATAC TTCCCGGCGG CGGAAGGCTT GATGACTGGC TGGATCCACC AACGCACGTT ACCGGCTTTT ATCTGCTCGA TGCGTTGCTT GAAGGCAACG GTGAAGTCTT CTTCAATGCG TTGCAACATC TCATCTTACC GGCATTAACG CTGGCGTTTG TTCACCTGGG GATTGTCGCC CGCCAGATCC GCTCAGCGAT GCTGGAACAA TTGAGTGAAG ACTACATTCG TACCGCCCGG GCCAGCGGCT TGCCCGGCTG GTATATCGTT CTATGTTATG CGCTACCCAA TGCGTTGATC CCTTCGATTA CCGTATTGGG GCTGGCGCTG GGCGATTTGT TGTATGGCGC AGTGCTCACC GAAACCGTTT TTGCCTGGCC CGGAATGGGG GCATGGGTAG TGACATCAAT ACAGGCGCTC GACTTCCCGG CAGTGATGGG CTTTGCCGTC GTGGTTTCAT TTGCTTATGT GCTGGTCAAC CTGGTGGTGG ATTTGCTCTA TTTGTGGATT GATCCGCGTA TCGGACGTGG AGGTGGTGAA TGA
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Protein sequence | MTFWSILRQR CWGLVLVVAG VCVITFIISH LIPGDPARLL AGDRASDAIV ENIRQQLGLD QPLYVQFYRY VSDLFHGDLG TSIRTGRPVL EELRIFFPAT LELAFCALLL ALLIGIPLGI LSAVWRNRWL DHLVRIMAIT GISTPAFWLG LGVIVLFYGH LQILPGGGRL DDWLDPPTHV TGFYLLDALL EGNGEVFFNA LQHLILPALT LAFVHLGIVA RQIRSAMLEQ LSEDYIRTAR ASGLPGWYIV LCYALPNALI PSITVLGLAL GDLLYGAVLT ETVFAWPGMG AWVVTSIQAL DFPAVMGFAV VVSFAYVLVN LVVDLLYLWI DPRIGRGGGE
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