| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2096 |
|---|
| Symbol | |
|---|
| ID | 6968880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli O157:H7 str. EC4115 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011353 |
|---|
| Strand | - |
|---|
| Start bp | 1993874 |
|---|
| End bp | 1994860 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643385997 |
|---|
| Product | ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_002270486 |
|---|
| Protein GI | 209396279 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAAC CCGTTCTGGA CATTCAACAA CTGCATTTGA GTTTCCCCGG TTTTAACGGC
GACGTTCACG CGCTCAACAA TGTGTCCTTG CAGATTAACC GCGGTGAAAT TGTCGGTCTG
GTGGGAGAAT CCGGCTCAGG TAAATCAGTC ACCGCAATGC TGATTATGCG TCTGCTACCG
ACGGGCAGTT ATTGCGTACA TCGGGGGCAG ATTTCACTGC TGGGAGACGA TGTTCTTAAC
GCGCGGGAAA AACAGCTTCG TCAGTGGCGC GGCGCACGAG TGGCGATGAT CTTTCAGGAA
CCGATGACCG CCCTCAATCC GACACGTCGA ATAGGTCTTC AGATGATGGA CGTGATCCGC
CATCATCAAC CAATAAGTCG TCGGGAAGCC AGAGCTAAAG CGATTGCCCT GCTGGAAGAG
ATGCAAATCC CGGATACCGT GGAAGTTATG TCGCGCTATC CGTTTGAGCT TTCAGGTGGT
ATGCGCCAGC GGGTAATGAT TGCGCTGGCA TTCTCCTGCG AACCGCAATT GATTATTGCC
GACGAACCGA CTACGGCGCT GGACGTCACG GTACAGTTGC AGGTACTGCG TTTGCTTAAA
CATAAAGCTC GCGACAGTGG AACTGCGGTA CTGTTCATCA GCCATGATAT GGCCGTGGTG
TCGCAACTGT GCGATAGCGT TTACGTGATG TATGCCGGAA GCGTGATTGA GAGCGGCGTG
ACGGCAGACG TTATCCATCA TCCCCGGCAT CCGTATACCA TTGGTTTGCT GCAATGCGCA
CCAGAACATG GAGTACCACG CCAGCCATTA CCCGCCATTC CAGGGACGGT ACCAAATCTC
ACCCATTTGC CTGACGGCTG CGCTTTTCGC GATCGTTGCT ATGCGGCAGG TGCACAGTGT
GAAAACGTCC CGGCGCTGAC AGCGTGTGGT GACAACAACC AGCGCTGCGC CTGTTGGTAT
CCGCAGCAGG AGGTCATAAG TGTCTGA
|
|---|
| Protein sequence | MTQPVLDIQQ LHLSFPGFNG DVHALNNVSL QINRGEIVGL VGESGSGKSV TAMLIMRLLP
TGSYCVHRGQ ISLLGDDVLN AREKQLRQWR GARVAMIFQE PMTALNPTRR IGLQMMDVIR
HHQPISRREA RAKAIALLEE MQIPDTVEVM SRYPFELSGG MRQRVMIALA FSCEPQLIIA
DEPTTALDVT VQLQVLRLLK HKARDSGTAV LFISHDMAVV SQLCDSVYVM YAGSVIESGV
TADVIHHPRH PYTIGLLQCA PEHGVPRQPL PAIPGTVPNL THLPDGCAFR DRCYAAGAQC
ENVPALTACG DNNQRCACWY PQQEVISV
|
|---|
| |