| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_2048 |
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| Symbol | ydcV |
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| ID | 6968332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 1945116 |
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| End bp | 1945910 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643385960 |
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| Product | ABC transporter, permease protein |
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| Protein accession | YP_002270449 |
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| Protein GI | 209396901 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.00000000240578 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCACTCTG AACGCGCACC GTTTTTCCTC AAACTGGCGG CCTGGGGCGG CGTTGTTTTC
CTACATTTTC CCATCCTGAT AATCGCCGCC TATGCGTTTA ACACTGAAGA TGCGGCGTTT
AGTTTTCCAC CGCAGGGCCT GACGCTGCGC TGGTTTAGCG TGGCAGCACA GCGTAGTGAT
ATTCTTGATG CCGTGACACT GTCACTTAAA GTGGCGGCGC TGGCGACATT AATGGCGCTG
GTGTTAGGGA CGCTGGCAGC TGCCGCGCTG TGGCGACGAG ACTTTTTCGG CAAAAACGCC
ATTTCGCTGT TACTGCTGCT GCCCATTGCG CTGCCGGGCA TTGTCACTGG TCTGGCGTTA
TTAACCGCCT TTAAAACCAT CAATCTGGAG TCGGGATTTT TCACCATCGT GGTCGGTCAT
GCGACTTTTT GTGTAGTTGT GGTGTTTAAC AATGTCATCG CCCGTTTTCG CCGCACCTCA
TGGAGTCTGG TTGAGGCGTC AATGGATCTT GGGGCCAATG GCTGGCAAAC CTTCCGCTAC
GTAGTGTTGC CGAATCTCAG TTCGGCGTTA CTGGCAGGAG GAATGCTGGC GTTTGCCTTG
TCGTTCGATG AAATCATCGT TACGACCTTT ACGGCAGGTC ATGAACGAAC GTTACCGTTG
TGGTTGCTCA ATCAGCTTGG GCGACCGCGT GATGTACCGG TAACTAACGT GGTGGCACTG
CTGGTTATGT TGGTAACAAC CTTGCCGATC CTGGGAGCCT GGTGGCTAAC CCGCGAAGGC
GACAATGGTC AATAA
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| Protein sequence | MHSERAPFFL KLAAWGGVVF LHFPILIIAA YAFNTEDAAF SFPPQGLTLR WFSVAAQRSD
ILDAVTLSLK VAALATLMAL VLGTLAAAAL WRRDFFGKNA ISLLLLLPIA LPGIVTGLAL
LTAFKTINLE SGFFTIVVGH ATFCVVVVFN NVIARFRRTS WSLVEASMDL GANGWQTFRY
VVLPNLSSAL LAGGMLAFAL SFDEIIVTTF TAGHERTLPL WLLNQLGRPR DVPVTNVVAL
LVMLVTTLPI LGAWWLTREG DNGQ
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