Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECH74115_2039 |
Symbol | |
ID | 6968511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli O157:H7 str. EC4115 |
Kingdom | Bacteria |
Replicon accession | NC_011353 |
Strand | + |
Start bp | 1936526 |
End bp | 1937062 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643385951 |
Product | DNA-binding protein |
Protein accession | YP_002270440 |
Protein GI | 209397754 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0000824446 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 5.01479e-19 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAAAATC TCGCTCGCTT TTTATCCACC ACACTTAAAC AACTACGTCA GCAGCGCGGC TGGAGTCTTT CGCGACTGGC AGAAGCGACG GGCGTTTCTA AAGCAATGTT AGGACAGATT GAGCGTAATG AGTCCAGCCC GACGGTCGCG ACATTATGGA AAATTGCCAC TGGGTTGAAC GTGCCATTTT CGACATTTAT TTCTCCGCCA CAGTCCGCTA CGCCTTCAGT TTATGATCCA CAACAGCAGG CGATGGTGAT CATTTCGCTG TTTCCTTATG ATCCACAACT CTGCTTTGAA CACTTCTCGA TTCAGATGGC ACCCGGTGCA ATAAGCGAAT CGACGCCCCA TGAGAAGGGG GTAATCGAAC ATGTCGTCGT CATTGATGGA CAACTTGATC TGTGCGTTGA TGGTGAATGG CAGACCCTTA ATTGTGGGGA AGGCGTTCGA TTTGCTGCAG ACGTCACGCA TATCTATCGT AATGGTGGGG AGCAAACCGT ACATTTTCAT TCCCTCATCC ATTACCCGCG CAGTTAA
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Protein sequence | MENLARFLST TLKQLRQQRG WSLSRLAEAT GVSKAMLGQI ERNESSPTVA TLWKIATGLN VPFSTFISPP QSATPSVYDP QQQAMVIISL FPYDPQLCFE HFSIQMAPGA ISESTPHEKG VIEHVVVIDG QLDLCVDGEW QTLNCGEGVR FAADVTHIYR NGGEQTVHFH SLIHYPRS
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