Gene ECH74115_2039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2039 
Symbol 
ID6968511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1936526 
End bp1937062 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content49% 
IMG OID643385951 
ProductDNA-binding protein 
Protein accessionYP_002270440 
Protein GI209397754 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000824446 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value5.01479e-19 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAAAATC TCGCTCGCTT TTTATCCACC ACACTTAAAC AACTACGTCA GCAGCGCGGC 
TGGAGTCTTT CGCGACTGGC AGAAGCGACG GGCGTTTCTA AAGCAATGTT AGGACAGATT
GAGCGTAATG AGTCCAGCCC GACGGTCGCG ACATTATGGA AAATTGCCAC TGGGTTGAAC
GTGCCATTTT CGACATTTAT TTCTCCGCCA CAGTCCGCTA CGCCTTCAGT TTATGATCCA
CAACAGCAGG CGATGGTGAT CATTTCGCTG TTTCCTTATG ATCCACAACT CTGCTTTGAA
CACTTCTCGA TTCAGATGGC ACCCGGTGCA ATAAGCGAAT CGACGCCCCA TGAGAAGGGG
GTAATCGAAC ATGTCGTCGT CATTGATGGA CAACTTGATC TGTGCGTTGA TGGTGAATGG
CAGACCCTTA ATTGTGGGGA AGGCGTTCGA TTTGCTGCAG ACGTCACGCA TATCTATCGT
AATGGTGGGG AGCAAACCGT ACATTTTCAT TCCCTCATCC ATTACCCGCG CAGTTAA
 
Protein sequence
MENLARFLST TLKQLRQQRG WSLSRLAEAT GVSKAMLGQI ERNESSPTVA TLWKIATGLN 
VPFSTFISPP QSATPSVYDP QQQAMVIISL FPYDPQLCFE HFSIQMAPGA ISESTPHEKG
VIEHVVVIDG QLDLCVDGEW QTLNCGEGVR FAADVTHIYR NGGEQTVHFH SLIHYPRS