Gene ECH74115_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_2020 
Symbol 
ID6968876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1919333 
End bp1920133 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content51% 
IMG OID643385937 
Producthypothetical protein 
Protein accessionYP_002270426 
Protein GI209395974 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.000193127 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACATTA CCCCGTTTCC GACGCTTTCG ACGGCAACTA TAGATGCCAT AAATGTTATC 
GGACAGTGGC TGGCGCAGGA TGATTTCTCC GGTGAGGTGC CGTATCAGGC TGATTGCGTC
ATACTTGCAG GAAATGCGGT TATGCCGACT ATCGATGCGG CATGTAAGAT TGCTCGCGAT
CAGCAAATTC CTTTACTGAT TAGTGGTGGT ATCGGTCACT CGACCACTTT TTTGTATAGC
GCCATCGCAC AGCATCCGCA CTACAACACT ATCCGCACCA CTGGCAGAGC AGAAGCGACC
ATCCTGGCGG ATATCGCTCA TCAGTTCTGG CATATTCCGC ATGAAAAAAT CTGGATTGAA
GACCAGTCAA CAAACTGCGG TGAAAACGCA CGCTTTAGCA TCGCGCTATT GAATCAGGCC
GTAGAACGAG TTCACACAGC TATCGTTGTA CAGGACCCCA CCATGCAGCG GCGCACGATG
GCGACGTTCC GCCGTATGAC CGGGGACAAT CCCGATGTAC CACGCTGGTT AAGTTATCCC
GGATTCGTTC CTCAGTTAGG AAATAACGCA GACAGTGTAA TCTTTATTAA TCAGTTACAA
GGATTATGGC CGGTTGAGCG TTATCTCTCA CTACTCACTG GCGAGCTGCC GCGTTTACGC
GATGATAGCG ATGGCTACGG TCCCCGCGGG CGAGATTTTA TCGTTCACGT TGATTTTCCG
GCAGAAGTCA TCCATGCATG GCAAACGCTG AAACACGATG CGGTGCTCAT CGAGGCGATG
GAAAGTCGCT CGTTACGTTA A
 
Protein sequence
MNITPFPTLS TATIDAINVI GQWLAQDDFS GEVPYQADCV ILAGNAVMPT IDAACKIARD 
QQIPLLISGG IGHSTTFLYS AIAQHPHYNT IRTTGRAEAT ILADIAHQFW HIPHEKIWIE
DQSTNCGENA RFSIALLNQA VERVHTAIVV QDPTMQRRTM ATFRRMTGDN PDVPRWLSYP
GFVPQLGNNA DSVIFINQLQ GLWPVERYLS LLTGELPRLR DDSDGYGPRG RDFIVHVDFP
AEVIHAWQTL KHDAVLIEAM ESRSLR