Gene ECH74115_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagECH74115_1998 
SymbolydbK 
ID6972301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli O157:H7 str. EC4115 
KingdomBacteria 
Replicon accessionNC_011353 
Strand
Start bp1889352 
End bp1892876 
Gene Length3525 bp 
Protein Length1174 aa 
Translation table11 
GC content54% 
IMG OID643385917 
Productpyruvate-flavodoxin oxidoreductase 
Protein accessionYP_002270406 
Protein GI209400785 
COG category[C] Energy production and conversion 
COG ID[COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID[TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0887926 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.942544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACTA TTGACGGTAA TGGCGCGGTT GCTTCGGTGG CGTTTCGCAC CAGTGAAGTT 
ATCGCCATCT ACCCTATTAC CCCCAGTTCC ACGATGGCAG AACAGGCTGA TGCCTGGGCC
GGAAACGGCT TGAAGAACGT TTGGGGAGAC ACACCACGCG TGGTTGAAAT GCAGTCGGAA
GCGGGTGCTA TCGCTACCGT GCATGGCGCT TTGCAGACGG GTGCCCTTTC AACATCGTTT
ACGTCATCGC AGGGTTTGCT GCTGATGATC CCGACGCTGT ACAAACTGGC AGGCGAACTC
ACACCGTTTG TCCTGCATGT AGCGGCACGT ACCGTTGCCA CACATGCACT CTCTATTTTT
GGCGATCATT CCGACGTCAT GGCGGTGCGC CAGACGGGTT GCGCGATGTT GTGTGCGGCA
AACGTCCAGG AAGCGCAAGA CTTTGCTCTC ATTTCGCACA TCGCGACGCT GAAAAGCCGC
GTGCCATTTA TTCATTTCTT TGATGGTTTC CGTACGTCCC ACGAAATCAA TAAAATTGTC
CCGCTGGCCG ATGACACTAT TCTTGATCTC ATGCCGCAGG CCGAAATTGA TGCTCATCGC
GCCCGGGCGC TCAACCCGGA ACATCCCGTG ATCCGCGGTA CGTCAGCCAA TCCTGACACT
TATTTCCAGT CTCGCGAAGC CACCAACCCA TGGTACAACG CGGTCTATGA CCATGTTGAA
CAGGCGATGA ATGATTTCTC TGCCGCGACA GGTCGTCAGT ATCAGCCGTT TGAATATTAC
GGGCATCCGC AAGCGGAACG GGTGATTATC CTGATGGGCT CTGCCATTGG CACCTGTGAA
GAAGTGGTTG ATGAATTGCT AACCCGTGGC GAAAAAGTTG GCGTGCTGAA AGTTCGCCTG
TACCGTCCCT TCTCCGCCAA ACACTTGCTG CAAGCTCTGC CGGGATCCGT ACGCAGCGTG
GCGGTACTGG ACAGAACCAA AGAACCCGGT GCCCAGGCAG AACCGCTCTA TCTGGATGTA
ATGACCGCAC TGGCAGAAGC CTTTAATAAT GGCGAGCGCG AAACTCTGCC CCGTGTCATT
GGTGGGCGCT ATGGTCTTTC ATCCAAAGAA TTTGGCCCGG ACTGTGTACT GGCGGTATTT
GCCGAGCTCA ACGCGGCTAA ACCGAAAGCG CGCTTTACGG TTGGTATTTA CGATGATGTG
ACCAATCTGT CACTGCCGTT GCCGGAAAAC ACCCTGCCAA ACTCGGCGAA ACTGGAAGCC
TTGTTTTATG GCCTTGGTAG TGATGGCAGC GTTTCCGCGA CCAAAAACAA TATCAAGATT
ATCGGTAATT CCACGCCGTG GTACGCACAG GGCTATTTTG TTTACGACTC CAAAAAGGCG
GGCGGCCTGA CGGTTTCTCA CCTTCGCGTG AGCGAACAGC CGATTCGTTC CGCTTATCTC
ATTTCCCAGG CTGATTTTGT TGGCTGCCAC CAGTTGCAGT TTATCGATAA ATATCAGATG
GCTGAGCGTT TAAAACCTGG CGGCATTTTC CTGCTCAACA CGCCGTACAG CGCAGATGAA
GTGTGGTCGC GCTTGCCGCA GGAAGTTCAG GCCGTGCTAA ATCAGAAAAA AGCGCGCTTC
TATGTGATTA ACGCGGCGAA AATCGCCCGC GAATGTGGCC TGGCGGCCCG TATTAATACC
GTCATGCAGA TGGCTTTTTT CCATCTGACA CAAATTCTGC CTGGCGATAG CGCCCTCGCA
GAATTGCAGG GTGCGATTGC CAAAAGTTAC AGTAGCAAAG GTCAGGATCT GGTGGAACGC
AACTGGCAGG CTCTGGCGCT GGCGCGTGAA TCCGTAGAAG AAGTTCCGTT GCAACCGGTA
AATCCGCACA GCGCCAATCG ACCGCCAGTG GTTTCCGATG CCGCCCCTGC TTTCGTGAAA
ACCGTAACCG CTGCGATGCT CGCCGGGCTT GGTGATGCCC TCCCCGTTTC GGCGCTGCCG
CCAGACGGCA CCTGGCCGAT GGGCACCACT CGCTGGGAAA AACGCAATAT CGCCGAAGAG
ATCCCCATCT GGAAAGAGGA ACTCTGTACC CAATGTAACC ACTGCGTCGC CGCTTGCCCA
CACTCAGCTA TTCGCGCAAA AGTGGTACCG CCTGAAGCGA TGGAAAACGC CCCTGCCAGC
CTGCATTCGC TGGATGTGAA ATCGCGTGAT ATGCGCGGGC AGAAATATGT CTTGCAGGTG
GCTCCGGAAG ATTGCACCGG TTGTAACCTG TGCGTCGAAG TTTGCCCGGC GAAAGACCGT
CAGAATCCAG AGATTAAAGC CATCAATATG ATGTCGCGCC TGGAACATGT CGAAGAAGAG
AAAATCAATT ACGATTTCTT CCTCAACCTG CCAGAAATCG ACCGTAGCAA ACTGGAACGT
ATTGATATTC GCACATCGCA GCTGATTACA CCGCTGTTTG AATATTCCGG TGCTTGCTCC
GGTTGTGGCG AGACGCCGTA TATTAAATTG CTGACTCAGC TCTATGGCGA CCGGATGTTG
ATCGCTAACG CCACCGGCTG TTCTTCAATT TATGGCGGTA ACCTGCCCTC TACACCGTAT
ACCACCGATG CCAACGGTCG TGGGCCGGCA TGGGCGAACT CTCTATTTGA AGATAATGCC
GAATTTGGCC TTGGTTTCCG CCTGACGGTC GATCAACACC GTGTCCGCGT GCTGCGTCTG
CTGGATCAAT TTGCCGATAA AATCCCGGCG GAATTACTGA CGGCGTTGAA ATCAGACGCC
ACGCCAGAGG TTCGTCGTGA ACAGGTTGCA GCTTTACGCC AGCAACTCAA CGATGTTGCC
GAAGCACATG AACTGCTGCG TGACGCAGAT GCACTGGTGG AAAAATCAAT CTGGCTGATT
GGTGGCGACG GCTGGGCTTA CGATATCGGC TTTGGCGGTC TGGATCATGT ATTGAGTTTG
ACGGAAAACG TCAACATTCT GGTGCTGGAT ACGCAATGCT ATTCCAACAC CGGTGGTCAG
GCGTCGAAAG CGACACCGCT GGGTGCAGTA ACTAAATTTG GCGAGCACGG CAAACGTAAA
GCGCGTAAAG ATCTTGGCGT CAGTATGATG ATGTACGGTC ATGTTTATGT GGCTCAGATT
TCTCTCGGCG CGCAGCTGAA CCAGACGGTG AAAGCGATTC AGGAAGCGGA AGCGTATCCG
GGACCATCGC TGATCATTGC TTATAGCCCG TGTGAAGAGC ATGGTTACGA TCTGGCACTC
AGCCATGACC AGATGCGCCA ACTCACAGCT ACCGGCTTCT GGCCGCTATA TCGCTTCGAT
CCGCGTCGTG CCGATGAAGG CAAACTGCCG CTGGCGCTGG ATTCACGCCC GCCGTCAGAA
GCACTGGAAG AAACGTTACT TCACGAGCAA CGTTTCCGTC GTCTGAATTC GCAGCAGCCA
GAAGTGGCAG AACAGTTATG GAAAGATGCT GCAGCTGATT TGCAAAAACG CTATGACTTC
CTGGCACAAA TGGCCGGAAA AGCGGAAAAA AGCAACACCG ATTAA
 
Protein sequence
MITIDGNGAV ASVAFRTSEV IAIYPITPSS TMAEQADAWA GNGLKNVWGD TPRVVEMQSE 
AGAIATVHGA LQTGALSTSF TSSQGLLLMI PTLYKLAGEL TPFVLHVAAR TVATHALSIF
GDHSDVMAVR QTGCAMLCAA NVQEAQDFAL ISHIATLKSR VPFIHFFDGF RTSHEINKIV
PLADDTILDL MPQAEIDAHR ARALNPEHPV IRGTSANPDT YFQSREATNP WYNAVYDHVE
QAMNDFSAAT GRQYQPFEYY GHPQAERVII LMGSAIGTCE EVVDELLTRG EKVGVLKVRL
YRPFSAKHLL QALPGSVRSV AVLDRTKEPG AQAEPLYLDV MTALAEAFNN GERETLPRVI
GGRYGLSSKE FGPDCVLAVF AELNAAKPKA RFTVGIYDDV TNLSLPLPEN TLPNSAKLEA
LFYGLGSDGS VSATKNNIKI IGNSTPWYAQ GYFVYDSKKA GGLTVSHLRV SEQPIRSAYL
ISQADFVGCH QLQFIDKYQM AERLKPGGIF LLNTPYSADE VWSRLPQEVQ AVLNQKKARF
YVINAAKIAR ECGLAARINT VMQMAFFHLT QILPGDSALA ELQGAIAKSY SSKGQDLVER
NWQALALARE SVEEVPLQPV NPHSANRPPV VSDAAPAFVK TVTAAMLAGL GDALPVSALP
PDGTWPMGTT RWEKRNIAEE IPIWKEELCT QCNHCVAACP HSAIRAKVVP PEAMENAPAS
LHSLDVKSRD MRGQKYVLQV APEDCTGCNL CVEVCPAKDR QNPEIKAINM MSRLEHVEEE
KINYDFFLNL PEIDRSKLER IDIRTSQLIT PLFEYSGACS GCGETPYIKL LTQLYGDRML
IANATGCSSI YGGNLPSTPY TTDANGRGPA WANSLFEDNA EFGLGFRLTV DQHRVRVLRL
LDQFADKIPA ELLTALKSDA TPEVRREQVA ALRQQLNDVA EAHELLRDAD ALVEKSIWLI
GGDGWAYDIG FGGLDHVLSL TENVNILVLD TQCYSNTGGQ ASKATPLGAV TKFGEHGKRK
ARKDLGVSMM MYGHVYVAQI SLGAQLNQTV KAIQEAEAYP GPSLIIAYSP CEEHGYDLAL
SHDQMRQLTA TGFWPLYRFD PRRADEGKLP LALDSRPPSE ALEETLLHEQ RFRRLNSQQP
EVAEQLWKDA AADLQKRYDF LAQMAGKAEK SNTD