| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECH74115_1992 |
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| Symbol | dbpA |
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| ID | 6972288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli O157:H7 str. EC4115 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011353 |
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| Strand | + |
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| Start bp | 1884685 |
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| End bp | 1886058 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643385914 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | YP_002270403 |
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| Protein GI | 209399223 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.639761 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCTT TTTCTACCCT GAATGTTTTG CCTCCCGCCC AACTCACGAA CCTTAATGAG
TTGGGTTATT TAACCATGAC GCCGGTGCAG GCCGCCGCGC TTCCGGCGAT CCTTGCCGGA
AAAGATGTTC GCGTGCAGGC GAAAACTGGC AGCGGCAAAA CGGCGGCTTT TGGCCTCGGC
TTGTTACAGC AAATTGATGC GTCGCTATTT CAAACCCAGG CTTTAGTGCT GTGTCCTACG
CGTGAACTGG CGGATCAGGT GGCAGGTGAA TTGCGTCGGC TGGCGCGTTT TCTGCCAAAT
ACCAAAATTT TGACGTTGTG CGGTGGTCAA CCGTTCGGTA TGCAGCGTGA TTCGTTGCAA
CATGCGCCGC ATATTATCGT GGCAACGCCG GGCCGTTTGC TGGATCACCT GCAAAAAGGC
ACGGTATCAC TGGATGCGCT GAATACTTTG GTGATGGATG AGGCCGACCG CATGCTGGAT
ATGGGATTTA GCGATGCCAT TGATGATGTC ATCCGTTTTG CGCCTGCATC TCGACAGACG
CTTCTGTTTT CGGCAACCTG GCCGGAAGCC ATCGCCGCAA TCAGCGGACG AGTGCAACGC
GATCCTTTGG CGATTGAAAT TGACTCAACA GATGCTTTGC CACCCATTGA ACAACAATTT
TATGAGACAT CCAGCAAAGG CAAAATTCCT CTGTTGCAAC GGTTATTAAG CTTGCATCAG
CCATCCTCTT GCGTGGTGTT TTGCAATACC AAAAAAGATT GCCAGGCTGT CTGCGACGCG
CTGAATGAAG TAGGGCAAAG TGCATTGTCA TTACACGGCG ATCTGGAGCA ACGCGATCGT
GATCAGACCC TGGTACGTTT TGCTAACGGT AGCGCCCGTG TACTGGTCGC GACTGATGTT
GCTGCGCGTG GTCTGGATAT TAAATCGCTT GAGCTGGTGG TGAACTTTGA GCTGGCGTGG
GACCCTGAAG TTCATGTACA TCGCATCGGT CGTACAGCTC GTGCAGGAAA TAGCGGTCTG
GCGATCAGTT TCTGTGCTCC GGAAGAAGCA CAGCGGGCCA ATATCATTTC TGACATGTTG
CAGATAAAAC TTAACTGGCA AACGCCACCA GCTAATAGTT CCATTGTGAC GCTGGAAGCA
GAAATGGCAA CGTTGTGTAT CGATGGCGGG AAAAAAGCCA AAATGCGCCC GGGTGATGTA
TTAGGTGCAC TGACAGGAGA TATCGGGCTT GATGGCGCAG ATATTGGCAA AATCGCCGTG
CATCCGGCGC ATGTCTATGT CGCGGTCCGT CAGGCTGTTG CTCATAAAGC ATGGAAACAG
TTACAGGGCG GGAAGATTAA AGGAAAAACG TGCCGGGTGC GGTTATTAAA ATAA
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| Protein sequence | MTAFSTLNVL PPAQLTNLNE LGYLTMTPVQ AAALPAILAG KDVRVQAKTG SGKTAAFGLG
LLQQIDASLF QTQALVLCPT RELADQVAGE LRRLARFLPN TKILTLCGGQ PFGMQRDSLQ
HAPHIIVATP GRLLDHLQKG TVSLDALNTL VMDEADRMLD MGFSDAIDDV IRFAPASRQT
LLFSATWPEA IAAISGRVQR DPLAIEIDST DALPPIEQQF YETSSKGKIP LLQRLLSLHQ
PSSCVVFCNT KKDCQAVCDA LNEVGQSALS LHGDLEQRDR DQTLVRFANG SARVLVATDV
AARGLDIKSL ELVVNFELAW DPEVHVHRIG RTARAGNSGL AISFCAPEEA QRANIISDML
QIKLNWQTPP ANSSIVTLEA EMATLCIDGG KKAKMRPGDV LGALTGDIGL DGADIGKIAV
HPAHVYVAVR QAVAHKAWKQ LQGGKIKGKT CRVRLLK
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